Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 RNU6-410P-201ENST00000517006 107 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 SNORA31.22-201ENST00000517204 135 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 HMGB1P41-201ENST00000520234 440 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC103783.1-201ENST00000520506 373 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 AP002404.1-201ENST00000532005 451 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 AL359212.1-201ENST00000556608 614 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC017071.1-201ENST00000564407 2204 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC034105.3-201ENST00000565294 442 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 AC068135.2-201ENST00000569293 1028 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 AL022099.1-201ENST00000604551 712 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 RDM1-219ENST00000615378 542 ntTSL 3 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 MIR1321-201ENST00000637766 79 ntBASIC3.06□□□□□ -1.92
TM9SF4Q92544 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TM9SF4Q92544 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.06□□□□□ -1.92
TM9SF4Q92544 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TM9SF4Q92544 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.05□□□□□ -1.92
TM9SF4Q92544 RPL7P26-201ENST00000333817 754 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 RNU6-188P-201ENST00000364207 107 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
TM9SF4Q92544 RNU6-1074P-201ENST00000383995 104 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 MIR558-201ENST00000384920 94 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 RNU6-278P-201ENST00000390945 109 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 AL136372.1-201ENST00000403060 228 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 AL357075.1-201ENST00000404107 726 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 RPL21P24-201ENST00000413752 448 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 MTCO3P12-201ENST00000416718 547 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 PPP1R11P2-201ENST00000423543 382 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 AC137499.1-201ENST00000427602 88 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 AL606489.2-201ENST00000433886 234 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 MTATP6P16-201ENST00000434543 526 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 HIGD1AP11-201ENST00000438361 280 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 HMGB3P11-201ENST00000440127 604 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 AL353572.1-201ENST00000442490 417 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 AC008481.1-201ENST00000463278 396 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 RNU6-1281P-201ENST00000516223 105 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 RNA5SP341-201ENST00000516261 117 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 RNU1-143P-201ENST00000516296 146 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 AC090136.1-201ENST00000520009 240 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 FAM60DP-201ENST00000524174 632 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 MTND1P35-201ENST00000526739 508 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 LARP7P3-201ENST00000579888 337 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 MIR4513-201ENST00000581077 86 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 U1.23-201ENST00000610293 146 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 RNU1-68P-201ENST00000615382 146 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 U1.39-201ENST00000621562 146 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 AC073476.4-201ENST00000628409 72 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.05□□□□□ -1.92
TM9SF4Q92544 AC009487.2-201ENST00000420969 6821 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 AF117829.1-206ENST00000621883 3802 ntBASIC3.05□□□□□ -1.92
TM9SF4Q92544 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TM9SF4Q92544 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 HSPE1P11-201ENST00000339579 310 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 RNU6-1120P-201ENST00000362988 108 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 RNU6-1097P-201ENST00000363586 107 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 Y_RNA.295-201ENST00000364918 102 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 AL591416.1-201ENST00000404015 867 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 RNU6-908P-201ENST00000410160 94 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 Z99755.1-201ENST00000414048 380 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 RPL30P16-201ENST00000419341 429 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 COTL1P1-201ENST00000422309 375 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 OR2AS1P-201ENST00000427827 319 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 RPS20P5-201ENST00000434808 360 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 MTCO3P45-201ENST00000443036 613 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 WASF1P1-201ENST00000447560 1131 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 DPPA3P1-201ENST00000448050 469 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 CACYBPP2-201ENST00000453625 678 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 AC010285.1-201ENST00000470580 392 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 RPS29P25-201ENST00000481709 171 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 AC233702.1-201ENST00000482905 502 ntBASIC3.04□□□□□ -1.92
TM9SF4Q92544 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
TM9SF4Q92544 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.04□□□□□ -1.92
TM9SF4Q92544 SNORD27.1-201ENST00000516319 72 ntBASIC3.04□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms