Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC007938.3-201ENST00000604965 623 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 Z82243.1-201ENST00000609432 473 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 PLCE1P1-201ENST00000622094 305 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC009033.1-201ENST00000624279 431 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 U2.21-201ENST00000637295 81 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 AC093536.2-201ENST00000565257 1406 ntBASIC3.66□□□□□ -1.82
RNF220Q5VTB9 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
RNF220Q5VTB9 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.65□□□□□ -1.82
RNF220Q5VTB9 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.65□□□□□ -1.82
RNF220Q5VTB9 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.65□□□□□ -1.82
RNF220Q5VTB9 FRG1CP-201ENST00000358464 769 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 RNA5SP399-201ENST00000364003 117 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 RNU6-283P-201ENST00000364788 107 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.378-201ENST00000365652 113 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 MT-TL1-201ENST00000386347 75 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 RPS4XP7-201ENST00000406274 780 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AL356776.1-201ENST00000406574 447 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 POLHP1-201ENST00000411806 470 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 BX682237.1-201ENST00000415016 335 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC009161.1-201ENST00000417306 376 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC098614.2-201ENST00000426040 255 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 MYL8P-204ENST00000431574 518 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC007389.2-201ENST00000434630 306 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 NUTF2P3-201ENST00000448540 384 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 MTATP6P7-201ENST00000453315 681 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC3.65□□□□□ -1.83
RNF220Q5VTB9 RNU6-1208P-201ENST00000459588 107 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 HMGB1P30-201ENST00000492455 606 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC079140.5-201ENST00000507882 310 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 RNU6-703P-201ENST00000516946 107 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 RAB9BP1-201ENST00000519581 626 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 CYCSP29-201ENST00000533731 318 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC008011.1-201ENST00000545989 227 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF220Q5VTB9 TRAV37-201ENST00000553906 342 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC037471.2-201ENST00000564941 598 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC073539.2-201ENST00000597113 165 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 ARF4P1-201ENST00000605447 541 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC092807.2-201ENST00000609367 243 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AP003122.6-201ENST00000623831 495 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 AC100810.6-201ENST00000638068 285 ntBASIC3.65□□□□□ -1.83
RNF220Q5VTB9 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.65□□□□□ -1.83
RNF220Q5VTB9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
RNF220Q5VTB9 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.86-201ENST00000363020 111 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 RNU6-778P-201ENST00000363269 103 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 RNU1-73P-201ENST00000383971 164 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 SNORA75B-201ENST00000384053 137 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 SNORA40C-201ENST00000391285 128 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 Y_RNA.615-201ENST00000410769 117 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 RPL26P27-201ENST00000414397 437 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 AC138393.2-201ENST00000414742 246 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 AC007390.1-201ENST00000415722 356 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 AL353621.1-201ENST00000418219 243 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 HSPE1P1-201ENST00000421494 318 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 NEK4P1-201ENST00000433383 879 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 AL353572.1-201ENST00000442490 417 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 RANP8-201ENST00000444720 713 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 VN1R34P-201ENST00000447387 883 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 MTND3P10-201ENST00000450967 341 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 RPL21P93-201ENST00000480465 489 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 AP002812.1-201ENST00000495378 474 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 MTND3P25-201ENST00000509243 135 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 PHBP14-201ENST00000512887 367 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 AC025465.4-201ENST00000513422 638 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 RNU6-189P-201ENST00000516120 101 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 RNU6-572P-201ENST00000516724 80 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 SNORA31.19-201ENST00000517079 126 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 MRPL49P2-201ENST00000521066 465 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 AC023575.1-201ENST00000580510 358 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 MIR548S-201ENST00000581352 82 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 AC018638.8-201ENST00000588755 281 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 U6.99-201ENST00000637524 83 ntBASIC3.64□□□□□ -1.83
RNF220Q5VTB9 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
RNF220Q5VTB9 MTND5P7-201ENST00000413558 1798 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms