Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.77□□□□□ -1.97
PEX3P56589 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
PEX3P56589 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.77□□□□□ -1.97
PEX3P56589 RNY3P10-201ENST00000384764 102 ntBASIC2.77□□□□□ -1.97
PEX3P56589 MIR592-201ENST00000384959 97 ntBASIC2.77□□□□□ -1.97
PEX3P56589 RN7SKP142-201ENST00000411236 328 ntBASIC2.77□□□□□ -1.97
PEX3P56589 RPL21P24-201ENST00000413752 448 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AL451054.2-201ENST00000420896 202 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC008850.1-201ENST00000427546 362 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC236972.1-201ENST00000433225 199 ntBASIC2.77□□□□□ -1.97
PEX3P56589 RPL22P17-201ENST00000438729 315 ntBASIC2.77□□□□□ -1.97
PEX3P56589 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.77□□□□□ -1.97
PEX3P56589 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.77□□□□□ -1.97
PEX3P56589 AC020550.1-201ENST00000447385 163 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC009961.3-201ENST00000449832 765 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.77□□□□□ -1.97
PEX3P56589 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC2.77□□□□□ -1.97
PEX3P56589 AC108059.3-201ENST00000456388 214 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AL122001.1-201ENST00000457027 370 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AL049714.1-201ENST00000466686 347 ntBASIC2.77□□□□□ -1.97
PEX3P56589 RPS23P3-201ENST00000470993 430 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC010631.1-201ENST00000474150 156 ntBASIC2.77□□□□□ -1.97
PEX3P56589 RPS27AP9-201ENST00000477681 438 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC126182.1-201ENST00000478134 357 ntBASIC2.77□□□□□ -1.97
PEX3P56589 RPL31P60-201ENST00000478450 367 ntBASIC2.77□□□□□ -1.97
PEX3P56589 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC2.77□□□□□ -1.97
PEX3P56589 AC105313.1-201ENST00000509121 353 ntBASIC2.77□□□□□ -1.97
PEX3P56589 TTC39CP1-201ENST00000512513 755 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC114781.4-201ENST00000513707 639 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.77□□□□□ -1.97
PEX3P56589 Y_RNA.695-201ENST00000516715 107 ntBASIC2.77□□□□□ -1.97
PEX3P56589 HMGN1P28-201ENST00000521340 364 ntBASIC2.77□□□□□ -1.97
PEX3P56589 CASP1P1-201ENST00000526345 212 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC007115.1-201ENST00000546853 234 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.77□□□□□ -1.97
PEX3P56589 AC027176.1-201ENST00000560204 514 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC2.77□□□□□ -1.97
PEX3P56589 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.77□□□□□ -1.97
PEX3P56589 AC010133.1-201ENST00000615809 842 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AL136313.1-201ENST00000624804 202 ntBASIC2.77□□□□□ -1.97
PEX3P56589 AC010149.2-201ENST00000637608 315 ntBASIC2.77□□□□□ -1.97
PEX3P56589 PSMD5-AS1-215ENST00000640622 205 ntBASIC2.77□□□□□ -1.97
PEX3P56589 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.77□□□□□ -1.97
PEX3P56589 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PEX3P56589 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.77□□□□□ -1.97
PEX3P56589 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PEX3P56589 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PEX3P56589 RNU6-1284P-201ENST00000363701 100 ntBASIC2.76□□□□□ -1.97
PEX3P56589 RNU1-109P-201ENST00000383960 147 ntBASIC2.76□□□□□ -1.97
PEX3P56589 MIR518C-201ENST00000384822 101 ntBASIC2.76□□□□□ -1.97
PEX3P56589 AL139095.1-201ENST00000404326 391 ntBASIC2.76□□□□□ -1.97
PEX3P56589 RPS3AP3-201ENST00000411933 242 ntBASIC2.76□□□□□ -1.97
PEX3P56589 USP9YP36-201ENST00000424581 829 ntBASIC2.76□□□□□ -1.97
PEX3P56589 AL589872.1-201ENST00000426602 288 ntBASIC2.76□□□□□ -1.97
PEX3P56589 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.76□□□□□ -1.97
PEX3P56589 RPL36AP6-201ENST00000435770 321 ntBASIC2.76□□□□□ -1.97
PEX3P56589 AC009961.2-201ENST00000435771 251 ntBASIC2.76□□□□□ -1.97
PEX3P56589 MTCO2P16-201ENST00000436962 677 ntBASIC2.76□□□□□ -1.97
PEX3P56589 MTND4P32-201ENST00000437189 1237 ntBASIC2.76□□□□□ -1.97
PEX3P56589 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC2.76□□□□□ -1.97
PEX3P56589 MTND1P29-201ENST00000448112 647 ntBASIC2.76□□□□□ -1.97
PEX3P56589 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.76□□□□□ -1.97
PEX3P56589 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.76□□□□□ -1.97
PEX3P56589 AL135752.1-201ENST00000479477 471 ntBASIC2.76□□□□□ -1.97
PEX3P56589 AL049874.1-201ENST00000489560 388 ntBASIC2.76□□□□□ -1.97
PEX3P56589 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.76□□□□□ -1.97
PEX3P56589 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC2.76□□□□□ -1.97
PEX3P56589 AC022447.1-201ENST00000515358 464 ntBASIC2.76□□□□□ -1.97
PEX3P56589 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.76□□□□□ -1.97
PEX3P56589 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.76□□□□□ -1.97
PEX3P56589 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.76□□□□□ -1.97
PEX3P56589 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.76□□□□□ -1.97
PEX3P56589 MIR5092-201ENST00000583139 88 ntBASIC2.76□□□□□ -1.97
PEX3P56589 AC005771.1-201ENST00000585581 349 ntBASIC2.76□□□□□ -1.97
PEX3P56589 AC073544.2-201ENST00000601155 540 ntBASIC2.76□□□□□ -1.97
PEX3P56589 RNU6-87P-201ENST00000607561 108 ntBASIC2.76□□□□□ -1.97
PEX3P56589 SDR42E1P2-201ENST00000614861 481 ntBASIC2.76□□□□□ -1.97
PEX3P56589 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PEX3P56589 AC068831.7-201ENST00000616954 363 ntBASIC2.76□□□□□ -1.97
PEX3P56589 SNHG22-203ENST00000617833 660 ntBASIC2.76□□□□□ -1.97
PEX3P56589 U4.3-201ENST00000621047 82 ntBASIC2.76□□□□□ -1.97
PEX3P56589 AC243829.7-201ENST00000633081 225 ntBASIC2.76□□□□□ -1.97
PEX3P56589 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PEX3P56589 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
PEX3P56589 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
PEX3P56589 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.75□□□□□ -1.97
PEX3P56589 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
PEX3P56589 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
PEX3P56589 U8.3-201ENST00000363321 132 ntBASIC2.75□□□□□ -1.97
PEX3P56589 SNORA75-201ENST00000384158 137 ntBASIC2.75□□□□□ -1.97
PEX3P56589 Y_RNA.500-201ENST00000384466 111 ntBASIC2.75□□□□□ -1.97
PEX3P56589 RNU6-1197P-201ENST00000391183 107 ntBASIC2.75□□□□□ -1.97
PEX3P56589 TXNP7-201ENST00000406296 293 ntBASIC2.75□□□□□ -1.97
PEX3P56589 RN7SKP140-201ENST00000411196 284 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC2.75□□□□□ -1.97
PEX3P56589 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.75□□□□□ -1.97
PEX3P56589 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC2.75□□□□□ -1.97
PEX3P56589 USP9YP29-201ENST00000445112 563 ntBASIC2.75□□□□□ -1.97
PEX3P56589 AL360221.1-201ENST00000445989 335 ntBASIC2.75□□□□□ -1.97
PEX3P56589 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms