Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC2.06□□□□□ -2.08
THRAP10827 AL118520.1-201ENST00000450770 291 ntBASIC2.06□□□□□ -2.08
THRAP10827 ZNF886P-201ENST00000450781 723 ntBASIC2.06□□□□□ -2.08
THRAP10827 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC2.06□□□□□ -2.08
THRAP10827 RPL12P25-201ENST00000455592 494 ntBASIC2.06□□□□□ -2.08
THRAP10827 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.06□□□□□ -2.08
THRAP10827 MTND1P16-201ENST00000465177 898 ntBASIC2.06□□□□□ -2.08
THRAP10827 TRBV1-201ENST00000476502 284 ntBASIC2.06□□□□□ -2.08
THRAP10827 RPS27P21-201ENST00000486977 252 ntBASIC2.06□□□□□ -2.08
THRAP10827 AC105252.1-201ENST00000503089 286 ntBASIC2.06□□□□□ -2.08
THRAP10827 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.06□□□□□ -2.08
THRAP10827 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.06□□□□□ -2.08
THRAP10827 AC022447.1-201ENST00000515358 464 ntBASIC2.06□□□□□ -2.08
THRAP10827 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC2.06□□□□□ -2.08
THRAP10827 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC2.06□□□□□ -2.08
THRAP10827 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.06□□□□□ -2.08
THRAP10827 AC135628.1-201ENST00000568867 534 ntBASIC2.06□□□□□ -2.08
THRAP10827 ABBA01006766.1-201ENST00000584728 294 ntBASIC2.06□□□□□ -2.08
THRAP10827 AL357094.1-201ENST00000603845 844 ntBASIC2.06□□□□□ -2.08
THRAP10827 AC009314.1-201ENST00000603871 304 ntBASIC2.06□□□□□ -2.08
THRAP10827 AC090186.1-201ENST00000605991 572 ntBASIC2.06□□□□□ -2.08
THRAP10827 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
THRAP10827 uc_338.20-201ENST00000621563 178 ntBASIC2.06□□□□□ -2.08
THRAP10827 DUXAP9-208ENST00000622815 614 ntBASIC2.06□□□□□ -2.08
THRAP10827 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.06□□□□□ -2.08
THRAP10827 AC013437.2-201ENST00000639587 677 ntBASIC2.06□□□□□ -2.08
THRAP10827 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
THRAP10827 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.06□□□□□ -2.08
THRAP10827 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
THRAP10827 SNORD116-12-201ENST00000384468 92 ntBASIC2.05□□□□□ -2.08
THRAP10827 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.05□□□□□ -2.08
THRAP10827 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.05□□□□□ -2.08
THRAP10827 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.05□□□□□ -2.08
THRAP10827 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC2.05□□□□□ -2.08
THRAP10827 AL358794.1-201ENST00000445689 381 ntBASIC2.05□□□□□ -2.08
THRAP10827 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC2.05□□□□□ -2.08
THRAP10827 USP9YP10-201ENST00000454868 628 ntBASIC2.05□□□□□ -2.08
THRAP10827 AC090515.1-201ENST00000465295 476 ntBASIC2.05□□□□□ -2.08
THRAP10827 AC106872.3-201ENST00000495104 446 ntBASIC2.05□□□□□ -2.08
THRAP10827 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC2.05□□□□□ -2.08
THRAP10827 RNU5F-8P-201ENST00000515941 111 ntBASIC2.05□□□□□ -2.08
THRAP10827 SCARNA17.1-201ENST00000516211 143 ntBASIC2.05□□□□□ -2.08
THRAP10827 SCARNA17.2-201ENST00000516334 143 ntBASIC2.05□□□□□ -2.08
THRAP10827 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
THRAP10827 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.05□□□□□ -2.08
THRAP10827 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.05□□□□□ -2.08
THRAP10827 MIR3935-201ENST00000583472 104 ntBASIC2.05□□□□□ -2.08
THRAP10827 AC025811.1-201ENST00000604312 472 ntBASIC2.05□□□□□ -2.08
THRAP10827 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.05□□□□□ -2.08
THRAP10827 SCARNA17.4-201ENST00000614296 143 ntBASIC2.05□□□□□ -2.08
THRAP10827 AC109809.1-201ENST00000619665 545 ntBASIC2.05□□□□□ -2.08
THRAP10827 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.05□□□□□ -2.08
THRAP10827 AC106858.1-201ENST00000637497 429 ntBASIC2.05□□□□□ -2.08
THRAP10827 AC099063.3-201ENST00000642066 185 ntBASIC2.05□□□□□ -2.08
THRAP10827 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
THRAP10827 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
THRAP10827 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
THRAP10827 FAM133CP-201ENST00000332869 704 ntBASIC2.04□□□□□ -2.08
THRAP10827 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.04□□□□□ -2.08
THRAP10827 Y_RNA.472-201ENST00000384322 102 ntBASIC2.04□□□□□ -2.08
THRAP10827 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC2.04□□□□□ -2.08
THRAP10827 AC023141.4-201ENST00000412031 328 ntBASIC2.04□□□□□ -2.08
THRAP10827 AC096649.2-201ENST00000416186 393 ntBASIC2.04□□□□□ -2.08
THRAP10827 SEPT2P1-201ENST00000419651 180 ntBASIC2.04□□□□□ -2.08
THRAP10827 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC2.04□□□□□ -2.08
THRAP10827 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
THRAP10827 PAXBP1P1-201ENST00000449315 447 ntBASIC2.04□□□□□ -2.08
THRAP10827 AC013267.1-201ENST00000458227 267 ntBASIC2.04□□□□□ -2.08
THRAP10827 MTND5P29-201ENST00000458676 1807 ntBASIC2.04□□□□□ -2.08
THRAP10827 MEMO1P3-201ENST00000459811 302 ntBASIC2.04□□□□□ -2.08
THRAP10827 AC108210.2-201ENST00000503681 201 ntBASIC2.04□□□□□ -2.08
THRAP10827 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC2.04□□□□□ -2.08
THRAP10827 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC2.04□□□□□ -2.08
THRAP10827 AC079395.1-201ENST00000510981 262 ntBASIC2.04□□□□□ -2.08
THRAP10827 AC109445.1-201ENST00000512356 383 ntBASIC2.04□□□□□ -2.08
THRAP10827 AC110760.3-202ENST00000515177 371 ntBASIC2.04□□□□□ -2.08
THRAP10827 SNORA19.3-201ENST00000516165 130 ntBASIC2.04□□□□□ -2.08
THRAP10827 RNA5SP364-201ENST00000516938 78 ntBASIC2.04□□□□□ -2.08
THRAP10827 AC091163.3-201ENST00000518269 1144 ntBASIC2.04□□□□□ -2.08
THRAP10827 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC2.04□□□□□ -2.08
THRAP10827 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
THRAP10827 AL359212.1-201ENST00000556608 614 ntBASIC2.04□□□□□ -2.08
THRAP10827 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC2.04□□□□□ -2.08
THRAP10827 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC2.04□□□□□ -2.08
THRAP10827 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.04□□□□□ -2.08
THRAP10827 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.04□□□□□ -2.08
THRAP10827 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.04□□□□□ -2.08
THRAP10827 AF038458.1-201ENST00000588406 262 ntBASIC2.04□□□□□ -2.08
THRAP10827 SNORD14A-201ENST00000606526 91 ntBASIC2.04□□□□□ -2.08
THRAP10827 AL449363.1-201ENST00000617815 186 ntBASIC2.04□□□□□ -2.08
THRAP10827 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC2.04□□□□□ -2.08
THRAP10827 AL031601.2-202ENST00000622650 282 ntBASIC2.04□□□□□ -2.08
THRAP10827 AC068057.2-201ENST00000624047 895 ntBASIC2.04□□□□□ -2.08
THRAP10827 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC2.03□□□□□ -2.08
THRAP10827 AC010329.5-201ENST00000623497 2174 ntBASIC2.03□□□□□ -2.08
THRAP10827 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.03□□□□□ -2.08
THRAP10827 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
THRAP10827 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.03□□□□□ -2.08
THRAP10827 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC2.03□□□□□ -2.08
THRAP10827 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms