Protein–RNA interactions for Protein: Q9Y6N9

USH1C, Harmonin, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1CQ9Y6N9 OR6C7P-201ENST00000547875 934 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AC007151.1-201ENST00000572774 483 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 MIR3912-201ENST00000577566 105 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 MIR3124-201ENST00000582636 67 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AL021368.1-201ENST00000607490 540 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 Y_RNA.783-201ENST00000613546 102 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 AC009268.2-201ENST00000621925 457 ntBASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
USH1CQ9Y6N9 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AC110491.1-201ENST00000562191 2010 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AL161781.1-201ENST00000354277 403 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 RNA5SP125-201ENST00000364843 120 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 RNU6-114P-201ENST00000384704 105 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AC068533.2-201ENST00000411872 306 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 RPL18AP17-201ENST00000455326 198 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AC021382.1-201ENST00000483523 359 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AP003497.1-201ENST00000528472 562 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AC026464.5-201ENST00000562497 722 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AC024619.4-201ENST00000580924 316 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AC239868.4-201ENST00000608318 671 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 SDR42E1P2-201ENST00000614861 481 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 AP002791.1-201ENST00000623291 381 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 MIR7157-201ENST00000635801 60 ntBASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC1.91□□□□□ -2.1
USH1CQ9Y6N9 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 MTCYBP38-201ENST00000417160 1123 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 ZYG11AP1-201ENST00000430329 837 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 MICF-203ENST00000432679 129 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 SNRPEP9-201ENST00000436794 238 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AL136380.1-201ENST00000447970 162 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 MTAPP1-201ENST00000489154 819 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AC087894.1-201ENST00000538359 518 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AC024614.2-201ENST00000577584 372 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 MTATP6P2-201ENST00000603319 678 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 SNRPGP19-201ENST00000603826 189 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AC004805.2-201ENST00000605382 482 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 TUG1_2.1-201ENST00000614234 87 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AP001486.3-201ENST00000615334 372 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 AC231657.1-201ENST00000624313 397 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 MIR3199-2-201ENST00000636243 86 ntBASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
USH1CQ9Y6N9 Y_RNA.408-201ENST00000383987 102 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 Y_RNA.578-201ENST00000390903 88 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AL023284.1-201ENST00000403956 276 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 CIR1P3-201ENST00000405137 479 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 NDUFS5P4-201ENST00000412983 318 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 BTF3L4P3-201ENST00000418879 476 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 DPH3P2-201ENST00000422618 250 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AL139415.2-201ENST00000431968 163 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC098831.1-201ENST00000440661 216 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC017099.1-201ENST00000448261 1028 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 MTND1P9-201ENST00000453775 944 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 PPP1R2P5-201ENST00000457256 603 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 UBL5P3-201ENST00000475112 231 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC104090.1-201ENST00000506341 1171 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 LTV1P1-201ENST00000510683 1237 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC104072.1-201ENST00000568817 668 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 AF038458.1-201ENST00000588406 262 ntBASIC1.89□□□□□ -2.11
USH1CQ9Y6N9 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms