Protein–RNA interactions for Protein: Q9P1Y6

PHRF1, PHD and RING finger domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 1,649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1Q9P1Y6 AC091932.3-201ENST00000624223 323 ntBASIC1.41□□□□□ -2.18
PHRF1Q9P1Y6 AP003400.6-201ENST00000624698 740 ntBASIC1.41□□□□□ -2.18
PHRF1Q9P1Y6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PHRF1Q9P1Y6 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
PHRF1Q9P1Y6 RNU6-1074P-201ENST00000383995 104 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 Y_RNA.493-201ENST00000384422 102 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 TAF9BP2-201ENST00000400856 499 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 RNU6-193P-201ENST00000410977 107 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AL356379.1-201ENST00000414105 126 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AL357134.1-201ENST00000445848 426 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 COX6CP18-201ENST00000448769 222 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC114801.2-201ENST00000503825 781 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC104108.1-201ENST00000509930 412 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 RNU6-1282P-201ENST00000516735 96 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 HAUS1P3-201ENST00000523909 662 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC004217.3-201ENST00000551552 878 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 CYP3A137P-201ENST00000562436 69 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC095057.3-201ENST00000567102 1157 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 MIR3973-201ENST00000579824 107 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC211469.2-201ENST00000605461 205 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC025588.4-201ENST00000615802 908 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 AC087359.1-201ENST00000508335 1740 ntBASIC1.4□□□□□ -2.18
PHRF1Q9P1Y6 SEC63P2-201ENST00000503863 1939 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 RNU1-62P-201ENST00000362599 164 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-1339P-201ENST00000363574 91 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 RNA5SP252-201ENST00000391131 119 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-1197P-201ENST00000391183 107 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 EBAG9P1-201ENST00000418955 543 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 RPL36P19-201ENST00000430744 301 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 HMGN1P33-201ENST00000432945 451 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 AC015922.2-201ENST00000435593 184 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 AP000949.1-201ENST00000438328 629 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 RPS27P1-201ENST00000450552 247 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 HIGD1AP6-201ENST00000521833 279 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 FAM60BP-201ENST00000578364 658 ntBASIC1.4□□□□□ -2.19
PHRF1Q9P1Y6 AC025263.3-201ENST00000622965 1396 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 MIR525-201ENST00000384978 85 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 MIR532-201ENST00000385025 91 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 MIR150-201ENST00000385048 84 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 MIR216A-201ENST00000385063 110 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 OR51A5P-201ENST00000415429 942 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 AL591704.2-201ENST00000421658 181 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 OFD1P12Y-201ENST00000427963 1207 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 OFD1P13Y-201ENST00000431179 1232 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 GPM6BP3-201ENST00000442797 145 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 MTND1P33-201ENST00000446251 917 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 SNRPGP6-201ENST00000451124 220 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-420P-201ENST00000458780 107 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 SNORA70.16-201ENST00000516390 95 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 MIR4295-201ENST00000585286 85 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 AC090116.1-201ENST00000615679 446 ntBASIC1.39□□□□□ -2.19
PHRF1Q9P1Y6 AC008669.1-201ENST00000565823 2178 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-1072P-201ENST00000384703 107 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 RNU6-443P-201ENST00000384780 107 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 MIR17-201ENST00000385012 84 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 RPL27AP8-201ENST00000424277 446 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 RAB11AP1-201ENST00000442978 646 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 MTND2P19-201ENST00000449129 1012 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 AC010099.1-201ENST00000455434 375 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 VPS26AP1-201ENST00000483197 979 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 MTCO1P31-201ENST00000506355 492 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 AC096745.1-201ENST00000509945 370 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 AC008676.3-201ENST00000521237 435 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 AC010738.1-201ENST00000604970 987 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 AC013468.1-201ENST00000608680 598 ntBASIC1.38□□□□□ -2.19
PHRF1Q9P1Y6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
PHRF1Q9P1Y6 ENSAP3-201ENST00000312710 333 ntBASIC1.37□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms