Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 DUTP6-201ENST00000425573 462 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AL451062.2-201ENST00000427515 271 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 RPS20P5-201ENST00000434808 360 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 Z75741.1-201ENST00000446793 314 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC003071.1-201ENST00000451219 789 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 RPL23AP31-201ENST00000456160 467 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 RPL21P8-201ENST00000465083 535 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC108860.1-201ENST00000484521 383 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 RNA5SP380-201ENST00000517190 98 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 ERHP1-201ENST00000523006 310 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC025678.1-201ENST00000567861 338 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AP000907.4-201ENST00000604143 237 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC017083.3-201ENST00000609955 700 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AL589994.2-201ENST00000621124 579 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.25□□□□□ -1.89
PCDH9Q9HC56 AC093831.2-201ENST00000624393 3427 ntBASIC3.25□□□□□ -1.89
PCDH9Q9HC56 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 ZNF680P1-201ENST00000436625 1469 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 Y_RNA.22-201ENST00000362492 102 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 RNU6-1120P-201ENST00000362988 108 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 Y_RNA.256-201ENST00000364594 104 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 RNU5E-6P-201ENST00000365574 115 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 Y_RNA.402-201ENST00000383972 102 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 RNU6-701P-201ENST00000384059 107 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 MTCO1P20-201ENST00000425366 358 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC008850.1-201ENST00000427546 362 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AL353705.1-201ENST00000433468 480 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 MTND2P24-201ENST00000453434 806 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 MTCO3P38-201ENST00000468910 766 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC034236.1-201ENST00000469891 373 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 Y_RNA.693-201ENST00000516641 110 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 MTND1P35-201ENST00000526739 508 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC093012.1-202ENST00000549403 582 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC034105.3-201ENST00000565294 442 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 MTCO3P24-201ENST00000572729 782 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC005951.2-201ENST00000576282 495 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AP002360.4-201ENST00000606980 481 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC010133.1-201ENST00000615809 842 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AL360181.4-201ENST00000621752 134 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 FRG1KP-201ENST00000623592 341 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 MIR3688-2-201ENST00000636963 87 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 MTND5P27-201ENST00000428871 1720 ntBASIC3.24□□□□□ -1.89
PCDH9Q9HC56 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
PCDH9Q9HC56 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 HSPE1P11-201ENST00000339579 310 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 RNU5A-1-201ENST00000362698 116 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 RNU6-1284P-201ENST00000363701 100 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 RNU6-74P-201ENST00000384235 107 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL359634.1-202ENST00000404721 284 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 RNU2-39P-201ENST00000410604 198 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC114491.1-201ENST00000416095 246 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 RAC1P6-201ENST00000423911 575 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 RPL7P46-201ENST00000425129 740 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 RPL21P40-201ENST00000428586 483 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 USP12PX-201ENST00000432383 1057 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL606489.2-201ENST00000433886 234 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 MTATP6P16-201ENST00000434543 526 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC006028.1-201ENST00000438379 402 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 GAPDHP27-201ENST00000447427 1020 ntBASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.23□□□□□ -1.89
PCDH9Q9HC56 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms