Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 DEFB108D-201ENST00000527787 222 ntBASIC3.6□□□□□ -1.83
SIN3AQ96ST3 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC3.6□□□□□ -1.83
SIN3AQ96ST3 AC009063.1-201ENST00000563342 702 ntBASIC3.6□□□□□ -1.83
SIN3AQ96ST3 AC068790.2-201ENST00000602601 557 ntBASIC3.6□□□□□ -1.83
SIN3AQ96ST3 AC007038.2-201ENST00000608095 740 ntBASIC3.6□□□□□ -1.83
SIN3AQ96ST3 AC099842.1-201ENST00000619919 596 ntBASIC3.6□□□□□ -1.83
SIN3AQ96ST3 PISRT1-201ENST00000626175 531 ntBASIC3.6□□□□□ -1.83
SIN3AQ96ST3 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC3.6□□□□□ -1.83
SIN3AQ96ST3 FARSBP1-201ENST00000435808 1778 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 RNA5SP289-201ENST00000362332 137 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 RNU5E-1-201ENST00000362477 120 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 Y_RNA.41-201ENST00000362646 102 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 RNA5SP456-201ENST00000364002 114 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 RNA5SP189-201ENST00000364920 115 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.59□□□□□ -1.83
SIN3AQ96ST3 RNU6-754P-201ENST00000391166 107 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 RPS3AP36-201ENST00000398190 775 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 HSPE1P26-201ENST00000405341 275 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 C1DP2-201ENST00000418167 426 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC3.59□□□□□ -1.83
SIN3AQ96ST3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC3.59□□□□□ -1.83
SIN3AQ96ST3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC3.59□□□□□ -1.83
SIN3AQ96ST3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.59□□□□□ -1.83
SIN3AQ96ST3 RPL23AP55-201ENST00000498163 452 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC114781.4-201ENST00000513707 639 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 RN7SKP298-201ENST00000515950 94 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AP003392.2-201ENST00000527269 208 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AL161729.4-201ENST00000604650 476 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC004908.2-201ENST00000609090 574 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AL590282.1-201ENST00000610379 1136 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC245517.5-201ENST00000611529 162 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC005332.10-201ENST00000612725 619 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC091834.1-201ENST00000614543 472 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC015540.1-201ENST00000615828 501 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AL360181.4-201ENST00000621752 134 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC048347.1-201ENST00000624621 427 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 AC110994.2-201ENST00000635481 492 ntBASIC3.59□□□□□ -1.83
SIN3AQ96ST3 MIR449A-201ENST00000362113 91 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 Y_RNA.505-201ENST00000384489 102 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 USP9YP36-201ENST00000424581 829 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 NEK4P1-201ENST00000433383 879 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 RPL21P112-201ENST00000434403 463 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AC004866.2-201ENST00000438285 481 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AC073614.1-201ENST00000438690 650 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AL590639.1-201ENST00000456484 337 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 RPS27P27-201ENST00000498779 255 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AC138853.1-201ENST00000503549 823 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 KLHL2P1-201ENST00000508691 521 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 CDC42P4-201ENST00000510507 563 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AC010265.1-201ENST00000513509 211 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 RNU6-430P-201ENST00000517078 107 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 HMGB1P41-201ENST00000520234 440 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AC005951.1-201ENST00000576706 485 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 FAM60BP-201ENST00000578364 658 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 KC877982.1-201ENST00000602313 470 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 DUXAP4-201ENST00000603046 613 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 uc_338.12-201ENST00000616344 181 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 AC009812.4-201ENST00000569134 1805 ntBASIC3.58□□□□□ -1.84
SIN3AQ96ST3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
SIN3AQ96ST3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
SIN3AQ96ST3 RNU6-1181P-201ENST00000384191 106 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 MIR592-201ENST00000384959 97 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 MIR607-201ENST00000385241 96 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 RPL23AP32-201ENST00000395315 459 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 ZNF885P-201ENST00000420174 1098 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 AC092447.7-201ENST00000422212 1621 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 PPP1R11P2-201ENST00000423543 382 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 AC104651.1-201ENST00000427559 735 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 MTATP6P4-201ENST00000427725 675 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.57□□□□□ -1.84
SIN3AQ96ST3 AC104850.1-201ENST00000435940 476 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.57□□□□□ -1.84
SIN3AQ96ST3 RPL35AP22-201ENST00000436855 335 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
SIN3AQ96ST3 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC3.57□□□□□ -1.84
SIN3AQ96ST3 MTND1P12-201ENST00000455231 147 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.57□□□□□ -1.84
SIN3AQ96ST3 RNU7-59P-201ENST00000459101 61 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 AC126182.1-201ENST00000478134 357 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.57□□□□□ -1.84
SIN3AQ96ST3 AC010587.1-201ENST00000505809 469 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 RPL37P25-201ENST00000507308 276 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 RNU6-720P-201ENST00000516363 108 ntBASIC3.57□□□□□ -1.84
SIN3AQ96ST3 RN7SKP244-201ENST00000516513 307 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms