Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 MIR4711-201ENST00000578274 70 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 RNU6-198P-201ENST00000384258 104 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 RPL21P90-201ENST00000415692 466 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 FAR2P3-204ENST00000434661 444 ntTSL 2 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AC079448.1-201ENST00000449377 373 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AC112518.2-201ENST00000508565 425 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 FAM71BP1-201ENST00000604431 523 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 SNORA23-201ENST00000365128 182 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AL358176.2-201ENST00000425769 204 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 RPL30P5-201ENST00000494923 336 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AL356473.1-201ENST00000406203 1408 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 HNRNPDLP3-201ENST00000456745 380 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AC108706.1-201ENST00000611053 297 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AL161629.2-201ENST00000615347 275 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 AP003485.1-201ENST00000625093 753 ntBASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC0.67□□□□□ -2.3
ALMS1Q8TCU4 RNU6-939P-201ENST00000384634 107 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 RNA5SP498-201ENST00000411342 120 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 MTND4LP5-201ENST00000605152 292 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AL356131.1-201ENST00000405826 414 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 RN7SKP158-201ENST00000410453 326 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 RPS27P1-201ENST00000450552 247 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 ANKRD26P4-201ENST00000455755 950 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 RNU7-27P-201ENST00000459281 62 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 RN7SKP179-201ENST00000516126 217 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AP003072.2-201ENST00000527756 676 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AC092140.2-201ENST00000618027 521 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AL109933.3-201ENST00000619095 188 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 RNU6-17P-201ENST00000384245 107 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 RNU6-18P-201ENST00000384527 107 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AL133384.1-201ENST00000412744 351 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 SUMO2P2-201ENST00000456482 255 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 snoU109.1-201ENST00000459339 135 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 RRN3P3-201ENST00000549207 578 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 IMMP1LP2-201ENST00000552954 492 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AC024619.4-201ENST00000580924 316 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AC135507.1-201ENST00000607214 561 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 AP003476.1-201ENST00000623984 516 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 CR848007.1-201ENST00000442354 1699 ntBASIC0.66□□□□□ -2.3
ALMS1Q8TCU4 RNA5SP450-201ENST00000411206 102 ntBASIC0.65□□□□□ -2.3
ALMS1Q8TCU4 OR51AB1P-201ENST00000429046 620 ntBASIC0.65□□□□□ -2.3
ALMS1Q8TCU4 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC0.65□□□□□ -2.3
ALMS1Q8TCU4 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC0.65□□□□□ -2.3
ALMS1Q8TCU4 DUXAP11-201ENST00000603858 526 ntBASIC0.65□□□□□ -2.3
ALMS1Q8TCU4 AC211469.2-201ENST00000605461 205 ntBASIC0.65□□□□□ -2.3
ALMS1Q8TCU4 AC103810.9-201ENST00000606688 112 ntBASIC0.65□□□□□ -2.3
ALMS1Q8TCU4 AC068620.4-201ENST00000636730 1182 ntBASIC0.65□□□□□ -2.3
ALMS1Q8TCU4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 SDAD1P2-201ENST00000441308 2028 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AC091812.1-201ENST00000432235 1948 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 GDI2P2-201ENST00000445131 608 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 OR6C7P-201ENST00000547875 934 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AC243960.4-201ENST00000600532 288 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AC006270.3-201ENST00000605967 1036 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AL138955.1-201ENST00000622881 1040 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 MTND5P9-201ENST00000503854 1755 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 RNA5SP127-201ENST00000411051 133 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 RPL7P34-201ENST00000433316 712 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 SNORD114-21-201ENST00000606412 72 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 AC139769.3-201ENST00000618383 175 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 GS1-279B7.1-204ENST00000641809 378 ntBASIC0.65□□□□□ -2.31
ALMS1Q8TCU4 MIR330-201ENST00000362196 94 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 SNORA31.16-201ENST00000516773 139 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC079395.3-201ENST00000615161 484 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 SNORD97-201ENST00000459187 142 ntBASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.64□□□□□ -2.31
ALMS1Q8TCU4 AC098614.2-201ENST00000426040 255 ntBASIC0.64□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms