Protein–RNA interactions for Protein: Q10570

CPSF1, Cleavage and polyadenylation specificity factor subunit 1, humanhuman

Known RBP Predictions only

Length 1,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1Q10570 RN7SKP179-201ENST00000516126 217 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF1Q10570 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC1.37□□□□□ -2.19
CPSF1Q10570 MIR3973-201ENST00000579824 107 ntBASIC1.37□□□□□ -2.19
CPSF1Q10570 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC1.37□□□□□ -2.19
CPSF1Q10570 SLC10A5P1-201ENST00000379063 1306 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 RNU6-339P-201ENST00000384310 107 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 RPS3AP24-201ENST00000407896 734 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 AC099677.1-201ENST00000420575 175 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC1.36□□□□□ -2.19
CPSF1Q10570 EZH2P1-201ENST00000431167 291 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 TRBV26OR9-2-201ENST00000432077 293 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC1.36□□□□□ -2.19
CPSF1Q10570 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.36□□□□□ -2.19
CPSF1Q10570 RPS27P1-201ENST00000450552 247 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC1.36□□□□□ -2.19
CPSF1Q10570 snoU109.4-201ENST00000458953 143 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 OR52A4P-202ENST00000481634 799 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC1.36□□□□□ -2.19
CPSF1Q10570 AC093767.1-201ENST00000504523 156 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 AC067904.2-201ENST00000517322 1283 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 LY96-202ENST00000518893 430 ntTSL 3 BASIC1.36□□□□□ -2.19
CPSF1Q10570 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.36□□□□□ -2.19
CPSF1Q10570 AC092470.1-201ENST00000546187 132 ntBASIC1.36□□□□□ -2.19
CPSF1Q10570 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC1.36□□□□□ -2.19
CPSF1Q10570 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC1.36□□□□□ -2.19
CPSF1Q10570 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CPSF1Q10570 Y_RNA.36-201ENST00000362602 112 ntBASIC1.35□□□□□ -2.19
CPSF1Q10570 RNU6-989P-201ENST00000362756 107 ntBASIC1.35□□□□□ -2.19
CPSF1Q10570 RNU6-233P-201ENST00000410845 141 ntBASIC1.35□□□□□ -2.19
CPSF1Q10570 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.35□□□□□ -2.19
CPSF1Q10570 OR6C66P-201ENST00000414917 930 ntBASIC1.35□□□□□ -2.19
CPSF1Q10570 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC1.35□□□□□ -2.19
CPSF1Q10570 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC1.35□□□□□ -2.19
CPSF1Q10570 MTCYBP3-201ENST00000445588 1137 ntBASIC1.35□□□□□ -2.19
CPSF1Q10570 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC1.35□□□□□ -2.19
CPSF1Q10570 RNA5SP436-201ENST00000516020 115 ntBASIC1.35□□□□□ -2.19
CPSF1Q10570 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.35□□□□□ -2.19
CPSF1Q10570 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC1.35□□□□□ -2.19
CPSF1Q10570 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.35□□□□□ -2.19
CPSF1Q10570 AP006248.3-201ENST00000623580 594 ntBASIC1.35□□□□□ -2.19
CPSF1Q10570 AL356473.1-201ENST00000406203 1408 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 MTND4P8-201ENST00000514997 1362 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC1.34□□□□□ -2.19
CPSF1Q10570 AC008555.8-201ENST00000623602 2168 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
CPSF1Q10570 RNU1-133P-201ENST00000364867 167 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 DSTNP4-201ENST00000399472 474 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 RNU6-712P-201ENST00000410558 100 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.34□□□□□ -2.19
CPSF1Q10570 AC098614.2-201ENST00000426040 255 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
CPSF1Q10570 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CPSF1Q10570 AL714022.1-201ENST00000439897 151 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC1.34□□□□□ -2.19
CPSF1Q10570 RPL23AP6-201ENST00000446637 472 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 AC116337.2-201ENST00000477662 156 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
CPSF1Q10570 LTV1P1-201ENST00000510683 1237 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 MIR449C-201ENST00000516047 92 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC1.34□□□□□ -2.19
CPSF1Q10570 PTK2-220ENST00000520151 573 ntTSL 4 BASIC1.34□□□□□ -2.19
CPSF1Q10570 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.34□□□□□ -2.19
CPSF1Q10570 HMGB1P14-201ENST00000557424 591 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.34□□□□□ -2.19
CPSF1Q10570 AC040174.2-201ENST00000602701 465 ntBASIC1.34□□□□□ -2.19
CPSF1Q10570 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC1.34□□□□□ -2.19
CPSF1Q10570 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.2
CPSF1Q10570 ZNF736P3Y-201ENST00000428264 1465 ntBASIC1.34□□□□□ -2.2
CPSF1Q10570 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC1.34□□□□□ -2.2
CPSF1Q10570 TPTE2P4-201ENST00000258589 1605 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 RNU6-19P-201ENST00000384718 107 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 RNU1-139P-201ENST00000391307 165 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 FCF1P2-201ENST00000415284 583 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 YWHAZP8-201ENST00000436935 731 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 AC004383.1-201ENST00000438135 289 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.33□□□□□ -2.2
CPSF1Q10570 AC098862.1-201ENST00000504991 413 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 SNORA70.16-201ENST00000516390 95 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.33□□□□□ -2.2
CPSF1Q10570 AC011712.1-201ENST00000588959 234 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 AC135507.1-201ENST00000607214 561 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 AC016252.1-201ENST00000609721 474 ntBASIC1.33□□□□□ -2.2
CPSF1Q10570 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.33□□□□□ -2.2
CPSF1Q10570 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
CPSF1Q10570 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CPSF1Q10570 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
CPSF1Q10570 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 MIR126-201ENST00000362291 85 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 SNORD14B-201ENST00000364533 90 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 EIF4EP4-201ENST00000424916 578 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 ARL5AP3-201ENST00000439327 386 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 SNORD97-201ENST00000459187 142 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.32□□□□□ -2.2
CPSF1Q10570 AC021087.2-201ENST00000504656 1203 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 AC104108.1-201ENST00000509930 412 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 RNA5SP384-201ENST00000516615 116 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 RRN3P3-201ENST00000549207 578 ntBASIC1.32□□□□□ -2.2
CPSF1Q10570 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms