Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC3P19447 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.98□□□□□ -1.61
ERCC3P19447 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
ERCC3P19447 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
ERCC3P19447 AL359837.1-201ENST00000381357 287 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 SNORA75B-201ENST00000384053 137 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 SNORD73A-201ENST00000386062 65 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 MIR1302-11-201ENST00000408051 138 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 MIR1302-9-201ENST00000408365 138 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 MIR1302-10-201ENST00000408734 138 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 VDAC1P9-201ENST00000412766 841 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 CYCSP33-201ENST00000414485 327 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC4.98□□□□□ -1.61
ERCC3P19447 AL157831.1-201ENST00000426134 473 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 SAR1AP4-201ENST00000429225 591 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 AL117339.2-201ENST00000430475 180 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.98□□□□□ -1.61
ERCC3P19447 AL162151.2-201ENST00000448875 158 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 MTND1P17-201ENST00000448961 204 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC3P19447 RPL30P15-201ENST00000457129 321 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.98□□□□□ -1.61
ERCC3P19447 RNU4ATAC7P-201ENST00000516280 125 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 RNA5SP519-201ENST00000516480 119 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.98□□□□□ -1.61
ERCC3P19447 AC087369.1-201ENST00000520775 996 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 AP005597.4-201ENST00000526762 229 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC4.98□□□□□ -1.61
ERCC3P19447 AC091178.1-203ENST00000584586 279 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.98□□□□□ -1.61
ERCC3P19447 MIR1302-2-201ENST00000607096 138 ntBASIC4.98□□□□□ -1.61
ERCC3P19447 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC4.98□□□□□ -1.61
ERCC3P19447 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.98□□□□□ -1.61
ERCC3P19447 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC3P19447 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
ERCC3P19447 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.98□□□□□ -1.61
ERCC3P19447 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.98□□□□□ -1.61
ERCC3P19447 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
ERCC3P19447 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.97□□□□□ -1.61
ERCC3P19447 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC4.97□□□□□ -1.61
ERCC3P19447 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
ERCC3P19447 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.97□□□□□ -1.61
ERCC3P19447 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.97□□□□□ -1.61
ERCC3P19447 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
ERCC3P19447 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC3P19447 AC066616.2-201ENST00000559334 1481 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 FRG1CP-201ENST00000358464 769 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 RNU1-20P-201ENST00000363314 162 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 RNU1-63P-201ENST00000383902 164 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 Y_RNA.394-201ENST00000383942 103 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 MIR10A-201ENST00000385043 110 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 Y_RNA.579-201ENST00000390939 94 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 HSPE1P26-201ENST00000405341 275 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 RNA5SP36-201ENST00000410197 133 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC3P19447 UBE2D3P2-201ENST00000424409 445 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 RPL7P37-201ENST00000425095 738 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 RPL21P91-201ENST00000429231 479 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 AL158071.1-201ENST00000430315 461 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC3P19447 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC3P19447 RNA5SP310-201ENST00000459084 116 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 HMGB3P15-201ENST00000507326 574 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 RNU6-1170P-201ENST00000515974 106 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 RNU1-61P-201ENST00000516107 151 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 Y_RNA.718-201ENST00000517110 102 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC3P19447 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.97□□□□□ -1.61
ERCC3P19447 HMGB1P14-201ENST00000557424 591 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.97□□□□□ -1.61
ERCC3P19447 AL139395.1-201ENST00000603662 160 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 MIR92B-201ENST00000607575 96 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 AL021997.2-201ENST00000615674 271 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 AC090971.5-201ENST00000621102 293 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 AC034229.5-201ENST00000624258 185 ntBASIC4.97□□□□□ -1.61
ERCC3P19447 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC3P19447 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC3P19447 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC3P19447 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.97□□□□□ -1.61
ERCC3P19447 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC3P19447 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
ERCC3P19447 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ERCC3P19447 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ERCC3P19447 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
ERCC3P19447 AC116096.1-201ENST00000566804 2314 ntBASIC4.96□□□□□ -1.61
ERCC3P19447 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC3P19447 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC3P19447 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC3P19447 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.96□□□□□ -1.62
ERCC3P19447 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
ERCC3P19447 RNU1-14P-201ENST00000362759 152 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 Y_RNA.135-201ENST00000363439 95 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 RNA5SP175-201ENST00000364275 119 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 MIR93-201ENST00000385024 80 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 AL445529.1-201ENST00000398713 389 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 RNU2-3P-201ENST00000410144 191 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 Y_RNA.623-201ENST00000411128 95 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.96□□□□□ -1.62
ERCC3P19447 COX6B1P7-201ENST00000430845 235 ntBASIC4.96□□□□□ -1.62
ERCC3P19447 RPL7P28-201ENST00000437739 740 ntBASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms