Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 MTCO1P42-201ENST00000457379 726 ntBASIC2.53□□□□□ -2
XRCC1P18887 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.53□□□□□ -2
XRCC1P18887 RAC1P5-201ENST00000512182 576 ntBASIC2.53□□□□□ -2
XRCC1P18887 SNORA31.15-201ENST00000516771 132 ntBASIC2.53□□□□□ -2
XRCC1P18887 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.53□□□□□ -2
XRCC1P18887 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.53□□□□□ -2
XRCC1P18887 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC2.53□□□□□ -2
XRCC1P18887 MIR4446-201ENST00000578505 67 ntBASIC2.53□□□□□ -2
XRCC1P18887 AC026790.2-201ENST00000606282 430 ntBASIC2.53□□□□□ -2
XRCC1P18887 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.53□□□□□ -2
XRCC1P18887 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
XRCC1P18887 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.53□□□□□ -2
XRCC1P18887 AC026241.1-201ENST00000517873 2142 ntBASIC2.53□□□□□ -2.01
XRCC1P18887 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC2.53□□□□□ -2.01
XRCC1P18887 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.52□□□□□ -2.01
XRCC1P18887 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.52□□□□□ -2.01
XRCC1P18887 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
XRCC1P18887 Y_RNA.97-201ENST00000363094 102 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 RNU6-501P-201ENST00000364072 100 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 U3.12-201ENST00000364498 214 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 RNU1-100P-201ENST00000365255 165 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
XRCC1P18887 USP9YP20-201ENST00000419224 558 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 MTND4P20-201ENST00000424125 869 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AL353777.1-201ENST00000425552 326 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.52□□□□□ -2.01
XRCC1P18887 TIMM9P1-201ENST00000436122 256 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.52□□□□□ -2.01
XRCC1P18887 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.52□□□□□ -2.01
XRCC1P18887 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC2.52□□□□□ -2.01
XRCC1P18887 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 RPL37P6-201ENST00000460682 294 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AC004263.1-201ENST00000479327 332 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
XRCC1P18887 MTND1P22-201ENST00000510572 951 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.52□□□□□ -2.01
XRCC1P18887 AC118465.1-201ENST00000513820 1271 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AC116347.2-201ENST00000514912 523 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 RNU6-1129P-201ENST00000515964 104 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 RNA5SP148-201ENST00000516527 94 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 RNA5SP290-201ENST00000517133 127 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC2.52□□□□□ -2.01
XRCC1P18887 SUB1P1-201ENST00000524415 382 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
XRCC1P18887 AC243972.3-201ENST00000539655 198 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC2.52□□□□□ -2.01
XRCC1P18887 MIR4293-201ENST00000584305 78 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AC104237.2-201ENST00000612456 443 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC2.52□□□□□ -2.01
XRCC1P18887 AC140725.3-201ENST00000616193 880 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AC008993.2-201ENST00000631744 806 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 FO624990.1-201ENST00000636373 85 ntBASIC2.52□□□□□ -2.01
XRCC1P18887 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
XRCC1P18887 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
XRCC1P18887 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
XRCC1P18887 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.51□□□□□ -2.01
XRCC1P18887 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.51□□□□□ -2.01
XRCC1P18887 Y_RNA.245-201ENST00000364493 95 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 MIR27B-201ENST00000385129 97 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AL513477.1-202ENST00000417061 214 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 ZNF90P2-204ENST00000419323 1075 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC2.51□□□□□ -2.01
XRCC1P18887 AC006366.1-201ENST00000422002 759 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AL593851.1-201ENST00000426171 157 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 ZNF736P5Y-201ENST00000451173 805 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.51□□□□□ -2.01
XRCC1P18887 RPS27P26-201ENST00000494583 239 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.51□□□□□ -2.01
XRCC1P18887 AC114786.4-201ENST00000508771 728 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC2.51□□□□□ -2.01
XRCC1P18887 AC114797.1-201ENST00000514003 728 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
XRCC1P18887 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.51□□□□□ -2.01
XRCC1P18887 AL391261.3-201ENST00000557194 520 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.51□□□□□ -2.01
XRCC1P18887 AC091489.2-201ENST00000566263 604 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 MIR3146-201ENST00000580367 79 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.51□□□□□ -2.01
XRCC1P18887 MTCYBP22-201ENST00000603788 447 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AC004223.4-201ENST00000612426 332 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AC034102.8-201ENST00000615146 484 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 MIR7844-201ENST00000616161 122 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AC009159.1-201ENST00000618386 642 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AC131159.1-201ENST00000621854 213 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AC017037.3-201ENST00000625016 472 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AC243829.7-201ENST00000633081 225 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 MTND5P29-201ENST00000458676 1807 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 AL359693.1-201ENST00000614959 2407 ntBASIC2.51□□□□□ -2.01
XRCC1P18887 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
XRCC1P18887 RNU4-82P-201ENST00000362443 140 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 RNU6-1167P-201ENST00000363227 94 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.5□□□□□ -2.01
XRCC1P18887 MIR767-201ENST00000390228 109 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 TAS2R15P-201ENST00000390674 928 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 RPS20P2-201ENST00000402520 389 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 SNORA11.2-201ENST00000408318 127 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 RNU6-193P-201ENST00000410977 107 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 ELOCP17-201ENST00000414751 326 ntBASIC2.5□□□□□ -2.01
XRCC1P18887 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms