Protein–RNA interactions for Protein: O00287

RFXAP, Regulatory factor X-associated protein, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFXAPO00287 RNA5SP22-201ENST00000365393 109 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 SNORD96B-201ENST00000386148 79 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AC069218.2-201ENST00000411665 344 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AL137014.1-201ENST00000420490 1226 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AC006011.1-201ENST00000442758 349 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AC073910.1-201ENST00000445047 438 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AC073587.1-201ENST00000447093 876 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 RNU7-187P-201ENST00000458985 68 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 RPL21P6-201ENST00000479171 504 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.39□□□□□ -1.71
RFXAPO00287 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.39□□□□□ -1.71
RFXAPO00287 RNU2-69P-201ENST00000516061 100 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.39□□□□□ -1.71
RFXAPO00287 OR5D17P-201ENST00000531492 978 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.39□□□□□ -1.71
RFXAPO00287 AC090517.1-201ENST00000569307 266 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC4.39□□□□□ -1.71
RFXAPO00287 AC009570.1-201ENST00000609599 745 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 MIR6868-201ENST00000611215 58 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 MIR8069-1-201ENST00000616627 86 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 FTX_2.1-201ENST00000618816 94 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 MIR8069-2-201ENST00000621412 86 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 AC007546.2-201ENST00000623996 360 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.39□□□□□ -1.71
RFXAPO00287 U6.105-201ENST00000637379 88 ntBASIC4.39□□□□□ -1.71
RFXAPO00287 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC4.39□□□□□ -1.71
RFXAPO00287 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFXAPO00287 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC4.39□□□□□ -1.71
RFXAPO00287 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
RFXAPO00287 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFXAPO00287 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFXAPO00287 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
RFXAPO00287 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
RFXAPO00287 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
RFXAPO00287 Y_RNA.180-201ENST00000363867 113 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 RNU6-715P-201ENST00000365204 103 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 SMIM11P1-201ENST00000369586 178 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 RNU6-128P-201ENST00000383976 107 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 MIR137-201ENST00000385223 102 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 MIR92A2-201ENST00000385299 75 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 HMGN1P24-201ENST00000412282 298 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.38□□□□□ -1.71
RFXAPO00287 AL353997.1-201ENST00000432936 108 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 RPL36AP6-201ENST00000435770 321 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.38□□□□□ -1.71
RFXAPO00287 RPS26P56-201ENST00000444468 240 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 RNU7-167P-201ENST00000459160 62 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.38□□□□□ -1.71
RFXAPO00287 AP001086.1-201ENST00000494882 321 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 AP003385.6-201ENST00000531603 374 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.38□□□□□ -1.71
RFXAPO00287 AC130289.1-201ENST00000577321 73 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 MIR3941-201ENST00000582572 103 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.38□□□□□ -1.71
RFXAPO00287 AC104763.2-201ENST00000604179 382 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 AC008162.1-201ENST00000604718 254 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 AL670379.4-201ENST00000605279 254 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 AL355816.1-201ENST00000607951 118 ntBASIC4.38□□□□□ -1.71
RFXAPO00287 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFXAPO00287 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFXAPO00287 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFXAPO00287 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFXAPO00287 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
RFXAPO00287 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RFXAPO00287 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
RFXAPO00287 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
RFXAPO00287 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFXAPO00287 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.37□□□□□ -1.71
RFXAPO00287 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFXAPO00287 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RFXAPO00287 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.37□□□□□ -1.71
RFXAPO00287 AL161912.2-201ENST00000565707 3007 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 AC138393.1-203ENST00000327086 343 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 RNU6-212P-201ENST00000362642 104 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 RNU6-249P-201ENST00000363016 102 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 SNORD27-201ENST00000363981 72 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 Y_RNA.274-201ENST00000364714 101 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 RNU4-42P-201ENST00000364738 142 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 Y_RNA.539-201ENST00000384635 107 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 RPL21P17-201ENST00000397467 475 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 AL139039.1-201ENST00000401900 692 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 RPS4XP7-201ENST00000406274 780 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 RNU2-33P-201ENST00000410344 192 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 Z74021.1-201ENST00000423610 407 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 RPL23AP25-201ENST00000430973 463 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 AC099799.1-201ENST00000439809 192 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 CYCSP32-201ENST00000440548 321 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.37□□□□□ -1.71
RFXAPO00287 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.37□□□□□ -1.71
RFXAPO00287 AL451050.1-201ENST00000450126 415 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 RPS11P1-201ENST00000451072 473 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.37□□□□□ -1.71
RFXAPO00287 SNORA25.11-201ENST00000515935 105 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 RNA5SP360-201ENST00000516555 118 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 SNORA81.3-201ENST00000517283 198 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 IGKV2D-19-201ENST00000523346 262 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.37□□□□□ -1.71
RFXAPO00287 RANP3-201ENST00000530970 276 ntBASIC4.37□□□□□ -1.71
RFXAPO00287 AC006064.5-201ENST00000541782 248 ntBASIC4.37□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 144.1 ms