Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 RNA5SP291-201ENST00000517222 105 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC023632.1-201ENST00000518463 375 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC118273.2-201ENST00000532092 465 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC022880.1-201ENST00000534017 973 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 HSBP1P1-201ENST00000555205 166 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AP001269.3-201ENST00000588718 329 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC011451.2-201ENST00000604303 598 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC100814.1-201ENST00000606963 623 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AL158211.4-201ENST00000606988 584 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AP000238.1-201ENST00000608759 426 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AL136981.2-201ENST00000617319 734 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC109809.1-201ENST00000619665 545 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC097460.3-201ENST00000623099 442 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AL159972.1-201ENST00000625150 448 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 PISRT1-201ENST00000626175 531 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 AC110491.1-201ENST00000562191 2010 ntBASIC1.32□□□□□ -2.2
TRAV1-1A0A0B4J248 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 U6.112-201ENST00000384129 70 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 CCNG1P1-201ENST00000406783 885 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR1294-201ENST00000408503 142 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR1261-201ENST00000408659 82 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 RN7SKP223-201ENST00000410582 62 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 TPMTP3-201ENST00000411928 735 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 XKRYP1-201ENST00000423438 492 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 DEFB130D-201ENST00000426866 237 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 RPL30P4-201ENST00000429309 333 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 XKRYP2-201ENST00000432915 492 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AC004383.1-201ENST00000438135 289 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 MTCO3P43-201ENST00000440974 771 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 TPRKBP1-201ENST00000456243 481 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 PMCHL2-203ENST00000457791 237 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 snoU13.26-201ENST00000459452 105 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 RPL30P9-201ENST00000465586 330 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 TMEM251P1-201ENST00000503717 318 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 EEF1A1P37-201ENST00000522748 715 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AP004607.1-201ENST00000524456 203 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AC090615.1-201ENST00000577519 154 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR4287-201ENST00000579398 78 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AL355297.2-201ENST00000604792 129 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AL390208.1-201ENST00000605885 644 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AC239868.4-201ENST00000608318 671 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AC069294.1-201ENST00000608397 350 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR8084-201ENST00000614105 89 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 U4atac.1-201ENST00000618345 95 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AC084824.4-201ENST00000620106 731 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 MKKS-204ENST00000639674 192 ntBASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.31□□□□□ -2.2
TRAV1-1A0A0B4J248 AP000648.3-201ENST00000623539 4507 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 ADAM3A-203ENST00000461344 2157 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 SNORA67.3-201ENST00000384366 140 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR218-1-201ENST00000384999 110 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR504-201ENST00000385065 83 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 SNRPEP2-201ENST00000397592 279 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 RN7SKP32-201ENST00000410167 303 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 RNA5SP270-201ENST00000411361 118 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 NDUFS5P4-201ENST00000412983 318 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 BX664727.1-201ENST00000416024 466 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC007435.1-201ENST00000421086 415 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 MTCO2P5-201ENST00000422621 426 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 SKA2P1-201ENST00000425592 390 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC007919.1-201ENST00000429380 217 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 MTCYBP15-201ENST00000433123 1127 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AL645568.3-201ENST00000433683 316 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AL121890.1-201ENST00000435457 205 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC087884.1-201ENST00000469738 328 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 RPL23AP42-201ENST00000471152 471 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC112518.2-201ENST00000508565 425 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AF213884.2-201ENST00000510417 903 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC022861.1-201ENST00000522981 663 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC084851.1-201ENST00000529105 249 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AP000873.5-201ENST00000533906 236 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AC012435.1-202ENST00000568772 240 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AL354943.1-201ENST00000572103 781 ntBASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 AP005230.1-201ENST00000585072 675 ntTSL 5 BASIC1.3□□□□□ -2.2
TRAV1-1A0A0B4J248 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms