Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 RPS29P15-201ENST00000458329 171 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 RNU6-333P-201ENST00000459117 107 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC012181.1-201ENST00000479895 423 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 RPS15AP36-201ENST00000492022 382 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 MTCO3P9-201ENST00000506989 781 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC112206.3-201ENST00000514578 389 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 RNU6-1092P-201ENST00000516955 87 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 MIR4703-201ENST00000577728 79 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC024619.4-201ENST00000580924 316 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC021646.1-201ENST00000605469 484 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC096577.2-201ENST00000611455 153 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC135507.2-201ENST00000612443 309 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AL442067.2-201ENST00000614033 363 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 SNHG22-203ENST00000617833 660 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC244205.2-202ENST00000635781 342 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 AC073346.2-201ENST00000624724 2058 ntBASIC3.86□□□□□ -1.79
DKK3Q9UBP4 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
DKK3Q9UBP4 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AL137003.2-201ENST00000606924 2538 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 RNA5SP119-201ENST00000362715 117 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 RNU6-1155P-201ENST00000363554 107 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 RNU4-20P-201ENST00000365601 151 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 RNU6-1029P-201ENST00000384109 107 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 SNORD37.1-201ENST00000390968 65 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AL590704.1-201ENST00000402856 794 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AL122016.1-201ENST00000403365 367 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 ARL5AP1-201ENST00000418991 388 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AL137014.1-201ENST00000420490 1226 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 TXNP1-201ENST00000441872 371 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 IGKV1OR-3-201ENST00000446944 348 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 RNU7-180P-201ENST00000459240 63 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 RNU6-329P-201ENST00000459618 107 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AC007547.1-201ENST00000462177 490 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AP002884.2-201ENST00000471647 395 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 PHBP14-201ENST00000512887 367 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 RNA5SP503-201ENST00000517047 117 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AP004371.1-201ENST00000525240 214 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AC109635.4-202ENST00000531666 412 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 ANP32BP3-201ENST00000559213 706 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AC093913.1-201ENST00000614178 329 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 TUG1_2.1-201ENST00000614234 87 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 AC011155.2-201ENST00000623202 216 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 DDX10P1-201ENST00000448545 1933 ntBASIC3.85□□□□□ -1.79
DKK3Q9UBP4 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
DKK3Q9UBP4 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
DKK3Q9UBP4 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AC005183.1-201ENST00000603687 1979 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.84□□□□□ -1.79
DKK3Q9UBP4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
DKK3Q9UBP4 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC3.84□□□□□ -1.79
DKK3Q9UBP4 RNU6-263P-201ENST00000363811 107 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 U3.12-201ENST00000364498 214 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 MIR34B-201ENST00000385076 84 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 RNU6-837P-201ENST00000391056 108 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 RNU4-26P-201ENST00000410270 107 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 RN7SKP140-201ENST00000411196 284 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 RNU6-387P-201ENST00000411331 105 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC3.84□□□□□ -1.79
DKK3Q9UBP4 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AL445584.1-201ENST00000431451 330 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 ATP5HP2-201ENST00000433885 485 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 MRPL50P4-201ENST00000446432 475 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AL162389.1-201ENST00000449233 177 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AL118520.1-201ENST00000450770 291 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AL133162.1-201ENST00000463228 453 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 RPL21P99-201ENST00000480369 423 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 HMGN1P13-201ENST00000505795 138 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AC103851.1-201ENST00000506833 274 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 AC110768.1-201ENST00000509222 400 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 Y_RNA.701-201ENST00000516812 110 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 RN7SKP256-201ENST00000517201 314 ntBASIC3.84□□□□□ -1.79
DKK3Q9UBP4 IGKV2D-19-201ENST00000523346 262 ntBASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms