Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 Y_RNA.192-201ENST00000363977 102 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 RNU4-68P-201ENST00000364314 141 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 MIR620-201ENST00000385232 95 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
COL21A1Q96P44 MIR320C1-201ENST00000408566 88 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 MTCO1P17-201ENST00000411522 491 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 NDUFS5P4-201ENST00000412983 318 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 USP9YP26-201ENST00000421008 661 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 MYL8P-204ENST00000431574 518 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 RPS15AP28-201ENST00000435088 386 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 RPS25P9-201ENST00000435591 252 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AL031659.1-201ENST00000447075 539 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 FCF1P6-201ENST00000456841 595 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 SUMO2P6-201ENST00000505273 288 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC022447.3-201ENST00000506865 495 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC008413.1-201ENST00000511864 177 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 MRPS36P2-201ENST00000512569 299 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AP003122.3-201ENST00000526316 255 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 MTCYBP23-201ENST00000558717 1102 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AF038458.1-201ENST00000588406 262 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 OR1M4P-201ENST00000589199 287 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC007938.3-201ENST00000604965 623 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AL592221.1-201ENST00000605266 382 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AL158050.2-201ENST00000605336 568 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC112220.3-201ENST00000605502 502 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC245517.5-201ENST00000611529 162 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC009269.6-201ENST00000621778 588 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AP000676.3-201ENST00000623299 569 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 AC099063.3-201ENST00000642066 185 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.16□□□□□ -2.06
COL21A1Q96P44 ELF2P3-201ENST00000445099 1506 ntBASIC2.16□□□□□ -2.06
COL21A1Q96P44 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
COL21A1Q96P44 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
COL21A1Q96P44 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL21A1Q96P44 RNU6-461P-201ENST00000364195 107 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
COL21A1Q96P44 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 OSTCP8-201ENST00000445117 448 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 RPL23AP70-201ENST00000483361 460 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 AC104435.1-201ENST00000483483 166 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 AC010587.2-201ENST00000511727 448 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 RNU1-41P-201ENST00000516161 162 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 RNU1-48P-201ENST00000516400 162 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 AP000889.2-201ENST00000532684 490 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 MRPS36P5-201ENST00000551909 298 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 AL359212.1-201ENST00000556608 614 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 ISCA1P3-201ENST00000577104 373 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 AC090616.3-201ENST00000582184 217 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 AL391834.2-201ENST00000609982 546 ntBASIC2.15□□□□□ -2.07
COL21A1Q96P44 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.15□□□□□ -2.07
COL21A1Q96P44 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
COL21A1Q96P44 MTND5P29-201ENST00000458676 1807 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 CKAP2P1-201ENST00000555477 2049 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 RNA5SP289-201ENST00000362332 137 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 OR5H15-201ENST00000383696 930 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 TAS2R15P-201ENST00000390674 928 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 RNU6-750P-201ENST00000390946 107 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 RNA5SP247-201ENST00000411181 105 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 UBE2FP1-201ENST00000416536 447 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 SEPT2P1-201ENST00000419651 180 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 TOMM20P4-201ENST00000427861 435 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 WARS2P1-201ENST00000429678 537 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 RPS15AP5-201ENST00000436276 388 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC098831.1-201ENST00000440661 216 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 AL513412.1-201ENST00000445708 553 ntTSL 4 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 MTCO1P27-201ENST00000448269 226 ntBASIC2.14□□□□□ -2.07
COL21A1Q96P44 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.14□□□□□ -2.07
COL21A1Q96P44 MTATP6P14-201ENST00000455189 673 ntBASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms