Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 AC080014.1-201ENST00000496877 1201 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 RPF2P2-201ENST00000504693 896 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2□□□□□ -2.09
LINC00477Q96M19 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2□□□□□ -2.09
LINC00477Q96M19 AC022483.1-201ENST00000514020 567 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 SUB1P1-201ENST00000524415 382 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2□□□□□ -2.09
LINC00477Q96M19 GLYCAM1-201ENST00000546596 285 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2□□□□□ -2.09
LINC00477Q96M19 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2□□□□□ -2.09
LINC00477Q96M19 MIR5092-201ENST00000583139 88 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 ABBA01006766.1-201ENST00000584728 294 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 HMGN1P30-201ENST00000589286 268 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC005498.1-201ENST00000592125 465 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2□□□□□ -2.09
LINC00477Q96M19 AP000860.1-201ENST00000605250 559 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2□□□□□ -2.09
LINC00477Q96M19 TUG1_2.1-201ENST00000614234 87 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2□□□□□ -2.09
LINC00477Q96M19 AC091931.1-201ENST00000623488 728 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2□□□□□ -2.09
LINC00477Q96M19 AC091953.2-201ENST00000623979 160 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC019226.1-201ENST00000625666 515 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC093591.3-201ENST00000634516 308 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2□□□□□ -2.09
LINC00477Q96M19 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
LINC00477Q96M19 AC006927.3-201ENST00000638789 384 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 AC004944.1-201ENST00000517807 3059 ntBASIC2□□□□□ -2.09
LINC00477Q96M19 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2□□□□□ -2.09
LINC00477Q96M19 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC2□□□□□ -2.09
LINC00477Q96M19 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2□□□□□ -2.09
LINC00477Q96M19 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
LINC00477Q96M19 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 RNU6-270P-201ENST00000364131 105 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 RNY4P16-201ENST00000364768 94 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 RNU6-533P-201ENST00000384144 107 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 MIR514A1-201ENST00000385133 98 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 MIR325-201ENST00000385260 98 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 MIR1302-8-201ENST00000408342 128 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 RNA5SP21-201ENST00000410917 96 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC009414.1-201ENST00000427200 443 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC087499.2-201ENST00000432861 149 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC010153.1-201ENST00000432862 727 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 RAB6C-AS1-202ENST00000433431 123 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AL714022.1-201ENST00000439897 151 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AL590365.1-201ENST00000450788 243 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC010631.1-201ENST00000474150 156 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC116337.2-201ENST00000477662 156 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AP000797.1-201ENST00000478870 387 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC090525.1-201ENST00000479116 478 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 HSPE1P6-201ENST00000479457 291 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 NDUFB4P2-201ENST00000509515 391 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 TBCAP3-201ENST00000512475 312 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC114797.1-201ENST00000514003 728 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC026801.2-201ENST00000515352 425 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 RNU6-64P-201ENST00000517119 105 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 COX6CP5-201ENST00000527162 228 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 OR5BN1P-201ENST00000532955 829 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 TRAV28-201ENST00000557548 323 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AL356432.3-201ENST00000568952 465 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 MIR3944-201ENST00000581277 108 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 MIR4635-201ENST00000583759 79 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 TPMTP1-201ENST00000592307 737 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 Z99497.2-201ENST00000603634 310 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC121247.2-201ENST00000604776 136 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC007179.3-201ENST00000604976 235 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC092354.1-201ENST00000606057 376 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC098614.4-201ENST00000607601 462 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC096577.2-201ENST00000611455 153 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC092140.2-201ENST00000618027 521 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AC009159.1-201ENST00000618386 642 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 MIR6130-201ENST00000619419 109 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 AL355596.1-201ENST00000565399 3996 ntBASIC1.99□□□□□ -2.09
LINC00477Q96M19 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LINC00477Q96M19 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC1.98□□□□□ -2.09
LINC00477Q96M19 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
LINC00477Q96M19 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
LINC00477Q96M19 SNORD46.1-201ENST00000364139 104 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 RNU1-52P-201ENST00000384190 164 ntBASIC1.98□□□□□ -2.09
LINC00477Q96M19 RNU6-1072P-201ENST00000384703 107 ntBASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 115.2 ms