Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 RPL7P20-201ENST00000520308 745 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 OR5AQ1P-201ENST00000527596 927 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 AC109635.4-202ENST00000531666 412 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 BNIP3P9-201ENST00000603714 553 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AC069304.2-201ENST00000605154 435 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AC090115.4-201ENST00000609970 188 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AP001506.1-201ENST00000615444 211 ntBASIC3.25□□□□□ -1.89
SNED1Q8TER0 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SNED1Q8TER0 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC3.25□□□□□ -1.89
SNED1Q8TER0 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
SNED1Q8TER0 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNED1Q8TER0 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SNED1Q8TER0 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SNED1Q8TER0 RNU6-216P-201ENST00000363282 104 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 SNORA36C-201ENST00000384289 132 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 Y_RNA.573-201ENST00000384763 105 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 GSTA9P-201ENST00000406231 611 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 AL953862.1-201ENST00000423016 168 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 ELOCP14-201ENST00000428070 331 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 TIMM9P3-201ENST00000428659 274 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 HTR2A-AS1-201ENST00000430913 429 ntTSL 3 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 AC010881.1-201ENST00000433830 235 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 ELOCP7-201ENST00000439968 331 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 USP9YP8-201ENST00000441913 500 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 RNU7-170P-201ENST00000459303 61 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 SRIP1-201ENST00000489235 288 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 AC091951.2-201ENST00000500762 203 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 RNU6-875P-201ENST00000516488 106 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 SNORA18.6-201ENST00000516792 115 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 RNU6-430P-201ENST00000517078 107 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 MTCO2P4-201ENST00000517968 247 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 DEFB131D-201ENST00000526803 184 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 RAB11AP2-201ENST00000545905 639 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 AC092470.1-201ENST00000546187 132 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 AC093519.1-201ENST00000566109 298 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 MIR5697-201ENST00000578045 78 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 DUXAP4-201ENST00000603046 613 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 AC009033.1-201ENST00000624279 431 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 GDI2P1-201ENST00000429312 1336 ntBASIC3.24□□□□□ -1.89
SNED1Q8TER0 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
SNED1Q8TER0 AL022578.1-201ENST00000439330 1433 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SNED1Q8TER0 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 CBX3P1-201ENST00000325243 554 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 Y_RNA.38-201ENST00000362617 102 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 MIR592-201ENST00000384959 97 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 CALM2P3-201ENST00000400429 449 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 RPS3AP3-201ENST00000411933 242 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC007390.1-201ENST00000415722 356 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 C1DP2-201ENST00000418167 426 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AL159169.1-201ENST00000421119 127 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNED1Q8TER0 RABEPKP1-201ENST00000440529 1026 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SNED1Q8TER0 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC108078.1-201ENST00000508073 725 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 RNU6-202P-201ENST00000515998 96 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 RNA5SP216-201ENST00000516111 123 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 SNORA48.10-201ENST00000516965 160 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 AP004371.1-201ENST00000525240 214 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC022878.1-201ENST00000530684 149 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AP003385.6-201ENST00000531603 374 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 ANP32BP3-201ENST00000559213 706 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC008752.3-201ENST00000588113 712 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC3.23□□□□□ -1.89
SNED1Q8TER0 BNIP3P23-201ENST00000599655 511 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AL590282.1-201ENST00000610379 1136 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC025034.2-201ENST00000623264 286 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 AC068880.5-201ENST00000624331 290 ntBASIC3.23□□□□□ -1.89
SNED1Q8TER0 MTND1P37-201ENST00000636562 264 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms