Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AL442663.2-201ENST00000554385 511 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 SCOCP1-201ENST00000554676 349 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.9□□□□□ -1.79
SLC6A4P31645 AL355375.2-201ENST00000574825 175 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 BNIP3P25-201ENST00000596023 559 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 AC016727.1-205ENST00000605437 569 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 RNU1-30P-201ENST00000606575 163 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 AC007742.2-201ENST00000618226 398 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 AC099654.10-201ENST00000640395 161 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 AC018555.1-201ENST00000567548 1980 ntBASIC3.9□□□□□ -1.79
SLC6A4P31645 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.9□□□□□ -1.79
SLC6A4P31645 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.89□□□□□ -1.79
SLC6A4P31645 MAPK10-373ENST00000641983 6772 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 ZNF285B-201ENST00000561698 1767 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SLC6A4P31645 LINC02471-203ENST00000641941 4752 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 RNU5A-1-201ENST00000362698 116 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 RNU6-629P-201ENST00000384061 103 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 RNU6-1127P-201ENST00000384580 107 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 UBE2V1P2-201ENST00000397758 440 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 RNA5SP239-201ENST00000410218 129 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 YME1L1P1-201ENST00000429435 297 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC6A4P31645 USP9YP7-201ENST00000436723 430 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC6A4P31645 USP9YP32-201ENST00000452432 430 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 RPS24P6-201ENST00000452670 400 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC3.89□□□□□ -1.79
SLC6A4P31645 UBE2CP3-201ENST00000502715 450 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC6A4P31645 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC6A4P31645 HIGD1AP13-201ENST00000509878 289 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC6A4P31645 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC6A4P31645 RNU6-189P-201ENST00000516120 101 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AL118558.2-201ENST00000556294 238 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AC026464.5-201ENST00000562497 722 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC6A4P31645 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC3.89□□□□□ -1.79
SLC6A4P31645 MIR5187-201ENST00000583479 76 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC6A4P31645 AC113139.1-201ENST00000605049 239 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AL158032.1-201ENST00000605401 106 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AC007619.2-201ENST00000605743 379 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 SNORA51-201ENST00000606420 132 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
SLC6A4P31645 U2.17-201ENST00000611454 95 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 AC103705.1-201ENST00000619013 241 ntBASIC3.89□□□□□ -1.79
SLC6A4P31645 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC6A4P31645 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
SLC6A4P31645 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
SLC6A4P31645 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
SLC6A4P31645 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.89□□□□□ -1.79
SLC6A4P31645 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.88□□□□□ -1.79
SLC6A4P31645 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A4P31645 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A4P31645 PNPT1P2-201ENST00000456768 2050 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A4P31645 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A4P31645 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
SLC6A4P31645 Y_RNA.184-201ENST00000363884 108 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 Y_RNA.399-201ENST00000383955 105 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 Y_RNA.474-201ENST00000384341 102 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
SLC6A4P31645 AL356057.2-201ENST00000403318 432 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 RNA5SP111-201ENST00000411386 101 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AL513331.1-201ENST00000411908 397 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A4P31645 AC236972.2-201ENST00000434979 310 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A4P31645 PRPS1P1-201ENST00000445305 876 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AC008264.1-201ENST00000447612 367 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 RPS15AP27-201ENST00000449183 343 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A4P31645 HMGB3P30-201ENST00000457863 606 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AC010285.1-201ENST00000470580 392 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A4P31645 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A4P31645 AC079140.5-201ENST00000507882 310 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A4P31645 RNA5SP164-201ENST00000516533 110 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 Y_RNA.689-201ENST00000516589 107 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.88□□□□□ -1.79
SLC6A4P31645 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.88□□□□□ -1.79
SLC6A4P31645 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A4P31645 AC093027.1-201ENST00000546698 429 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AC107016.1-201ENST00000550463 337 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 MIR3921-201ENST00000577308 85 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A4P31645 AC092747.3-201ENST00000603769 301 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AL137849.1-201ENST00000604767 169 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 AL050343.2-201ENST00000607338 280 ntBASIC3.88□□□□□ -1.79
SLC6A4P31645 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC6A4P31645 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.88□□□□□ -1.79
SLC6A4P31645 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.88□□□□□ -1.79
SLC6A4P31645 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A4P31645 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
SLC6A4P31645 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
SLC6A4P31645 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC3.87□□□□□ -1.79
SLC6A4P31645 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms