Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDH3P22223 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH3P22223 AC009487.2-201ENST00000420969 6821 ntBASIC3.03□□□□□ -1.92
CDH3P22223 MIR422A-201ENST00000362286 90 ntBASIC3.03□□□□□ -1.92
CDH3P22223 OR5H15-201ENST00000383696 930 ntBASIC3.03□□□□□ -1.92
CDH3P22223 SNORD15B-201ENST00000384714 146 ntBASIC3.03□□□□□ -1.92
CDH3P22223 MIR493-201ENST00000385254 89 ntBASIC3.03□□□□□ -1.92
CDH3P22223 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.03□□□□□ -1.92
CDH3P22223 RPL21P75-201ENST00000396599 483 ntBASIC3.03□□□□□ -1.92
CDH3P22223 RPL21P28-201ENST00000401418 483 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AL592114.1-201ENST00000403842 483 ntBASIC3.03□□□□□ -1.92
CDH3P22223 RNU2-62P-201ENST00000410868 191 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AL663109.1-201ENST00000411498 844 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.03□□□□□ -1.92
CDH3P22223 AC245054.2-201ENST00000415639 319 ntBASIC3.03□□□□□ -1.92
CDH3P22223 C1DP2-201ENST00000418167 426 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH3P22223 RPL27AP8-201ENST00000424277 446 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH3P22223 ISCA1P6-201ENST00000427740 390 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH3P22223 AC093156.1-201ENST00000440382 670 ntBASIC3.03□□□□□ -1.92
CDH3P22223 RPL21P39-201ENST00000463605 483 ntBASIC3.03□□□□□ -1.92
CDH3P22223 MTCO2P29-201ENST00000465212 189 ntBASIC3.03□□□□□ -1.92
CDH3P22223 RPL31P60-201ENST00000478450 367 ntBASIC3.03□□□□□ -1.92
CDH3P22223 RPS29P2-201ENST00000479278 136 ntBASIC3.03□□□□□ -1.92
CDH3P22223 RPL21P93-201ENST00000480465 489 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AC233702.1-201ENST00000482905 502 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AC087190.1-201ENST00000484462 480 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH3P22223 AC093591.1-201ENST00000491435 481 ntBASIC3.03□□□□□ -1.92
CDH3P22223 RPL21P16-201ENST00000495531 483 ntBASIC3.03□□□□□ -1.92
CDH3P22223 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH3P22223 AC091435.1-201ENST00000505442 584 ntBASIC3.03□□□□□ -1.92
CDH3P22223 CDC42P4-201ENST00000510507 563 ntBASIC3.03□□□□□ -1.92
CDH3P22223 GMPSP1-201ENST00000514075 579 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH3P22223 ARL2BPP2-201ENST00000550907 489 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH3P22223 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH3P22223 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC3.03□□□□□ -1.92
CDH3P22223 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.03□□□□□ -1.92
CDH3P22223 MTND1P15-201ENST00000579262 949 ntBASIC3.03□□□□□ -1.92
CDH3P22223 MIR3682-201ENST00000581338 84 ntBASIC3.03□□□□□ -1.92
CDH3P22223 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH3P22223 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH3P22223 AC087683.1-201ENST00000591187 441 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AC020895.1-201ENST00000595362 272 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AC012119.1-201ENST00000603184 222 ntBASIC3.03□□□□□ -1.92
CDH3P22223 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH3P22223 AC103710.1-201ENST00000610003 901 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AC109347.2-201ENST00000610220 349 ntBASIC3.03□□□□□ -1.92
CDH3P22223 AL589743.7-201ENST00000612637 233 ntBASIC3.03□□□□□ -1.92
CDH3P22223 SDR42E1P2-201ENST00000614861 481 ntBASIC3.03□□□□□ -1.92
CDH3P22223 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.03□□□□□ -1.92
CDH3P22223 AC139792.2-201ENST00000624218 587 ntBASIC3.03□□□□□ -1.92
CDH3P22223 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
CDH3P22223 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
CDH3P22223 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH3P22223 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
CDH3P22223 RNU6-623P-201ENST00000363143 105 ntBASIC3.02□□□□□ -1.93
CDH3P22223 RNU6-1284P-201ENST00000363701 100 ntBASIC3.02□□□□□ -1.93
CDH3P22223 SNORD56.5-201ENST00000364281 72 ntBASIC3.02□□□□□ -1.93
CDH3P22223 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH3P22223 SNORA7.4-201ENST00000384249 137 ntBASIC3.02□□□□□ -1.93
CDH3P22223 SNORD116-4-201ENST00000384733 96 ntBASIC3.02□□□□□ -1.93
CDH3P22223 AL138885.1-201ENST00000405921 675 ntBASIC3.02□□□□□ -1.93
CDH3P22223 AL645937.1-202ENST00000421799 937 ntBASIC3.02□□□□□ -1.93
CDH3P22223 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH3P22223 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC3.02□□□□□ -1.93
CDH3P22223 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH3P22223 AC119618.1-201ENST00000434191 222 ntBASIC3.02□□□□□ -1.93
CDH3P22223 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH3P22223 AC073614.1-201ENST00000438690 650 ntBASIC3.02□□□□□ -1.93
CDH3P22223 USP9YP15-201ENST00000442391 422 ntBASIC3.02□□□□□ -1.93
CDH3P22223 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.02□□□□□ -1.93
CDH3P22223 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.02□□□□□ -1.93
CDH3P22223 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH3P22223 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH3P22223 AL049714.1-201ENST00000466686 347 ntBASIC3.02□□□□□ -1.93
CDH3P22223 RPL27AP5-201ENST00000469428 449 ntBASIC3.02□□□□□ -1.93
CDH3P22223 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH3P22223 RNU6-1220P-201ENST00000517126 108 ntBASIC3.02□□□□□ -1.93
CDH3P22223 NRON-201ENST00000517270 370 ntBASIC3.02□□□□□ -1.93
CDH3P22223 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.02□□□□□ -1.93
CDH3P22223 HSPE1P20-201ENST00000538133 289 ntBASIC3.02□□□□□ -1.93
CDH3P22223 AL355836.1-201ENST00000555951 870 ntBASIC3.02□□□□□ -1.93
CDH3P22223 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH3P22223 AC008498.1-201ENST00000613012 531 ntBASIC3.02□□□□□ -1.93
CDH3P22223 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.02□□□□□ -1.93
CDH3P22223 AC013476.2-201ENST00000614456 459 ntBASIC3.02□□□□□ -1.93
CDH3P22223 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
CDH3P22223 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.02□□□□□ -1.93
CDH3P22223 AC092447.7-201ENST00000422212 1621 ntBASIC3.01□□□□□ -1.93
CDH3P22223 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.01□□□□□ -1.93
CDH3P22223 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
CDH3P22223 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
CDH3P22223 RNU2-36P-201ENST00000410361 191 ntBASIC3.01□□□□□ -1.93
CDH3P22223 RNU2-16P-201ENST00000410712 136 ntBASIC3.01□□□□□ -1.93
CDH3P22223 RN7SKP140-201ENST00000411196 284 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 149.9 ms