Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC1.27□□□□□ -2.21
CXCL1P09341 GTF2IP12-201ENST00000456547 356 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.27□□□□□ -2.21
CXCL1P09341 RPL21P47-201ENST00000483696 477 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 BOLA3P3-201ENST00000505182 232 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.27□□□□□ -2.21
CXCL1P09341 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC1.27□□□□□ -2.21
CXCL1P09341 RNU6ATAC12P-201ENST00000516542 115 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.27□□□□□ -2.21
CXCL1P09341 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.27□□□□□ -2.21
CXCL1P09341 AC233702.2-202ENST00000562547 291 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AC124283.4-201ENST00000581815 456 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AC239868.4-201ENST00000608318 671 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AC024257.5-201ENST00000612739 531 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 MIR7974-201ENST00000615835 79 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 AL596245.1-201ENST00000618994 362 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 U2.21-201ENST00000637295 81 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 U6.101-201ENST00000637707 76 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
CXCL1P09341 AP000648.3-201ENST00000623539 4507 ntBASIC1.27□□□□□ -2.21
CXCL1P09341 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.26□□□□□ -2.21
CXCL1P09341 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC1.26□□□□□ -2.21
CXCL1P09341 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.26□□□□□ -2.21
CXCL1P09341 RNU5E-8P-201ENST00000363502 116 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 U3.13-201ENST00000364804 214 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 RNA5SP88-201ENST00000365560 109 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 CCNG1P1-201ENST00000406783 885 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 RN7SKP223-201ENST00000410582 62 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 AL353729.1-201ENST00000425044 720 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 AL512661.1-201ENST00000434586 1253 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 HSPE1P24-201ENST00000450782 238 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 AC117503.1-201ENST00000472241 394 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 RPS29P11-201ENST00000496507 171 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC1.26□□□□□ -2.21
CXCL1P09341 SLC25A15P5-201ENST00000508033 253 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 AC027309.2-201ENST00000520566 192 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC1.26□□□□□ -2.21
CXCL1P09341 AC107953.1-201ENST00000522216 297 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC1.26□□□□□ -2.21
CXCL1P09341 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC1.26□□□□□ -2.21
CXCL1P09341 AL354943.1-201ENST00000572103 781 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 NRBF2P1-201ENST00000587407 859 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC1.26□□□□□ -2.21
CXCL1P09341 LINC02098-202ENST00000609260 554 ntTSL 3 BASIC1.26□□□□□ -2.21
CXCL1P09341 AL138478.1-201ENST00000612252 832 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
CXCL1P09341 AL603758.1-201ENST00000618654 241 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 MIR3199-2-201ENST00000636243 86 ntBASIC1.26□□□□□ -2.21
CXCL1P09341 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.26□□□□□ -2.21
CXCL1P09341 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.26□□□□□ -2.21
CXCL1P09341 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.26□□□□□ -2.21
CXCL1P09341 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC1.26□□□□□ -2.21
CXCL1P09341 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
CXCL1P09341 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CXCL1P09341 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
CXCL1P09341 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CXCL1P09341 SUCLA2P2-201ENST00000417269 1309 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
CXCL1P09341 RNA5SP240-201ENST00000365355 128 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 SNRPEP2-201ENST00000397592 279 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 AL033519.2-201ENST00000403958 392 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 RN7SKP192-201ENST00000411291 327 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 RPL23AP39-201ENST00000415533 405 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 SFR1P2-201ENST00000421841 730 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 MTCO3P1-205ENST00000422088 832 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 AL645568.3-201ENST00000433683 316 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.25□□□□□ -2.21
CXCL1P09341 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC1.25□□□□□ -2.21
CXCL1P09341 AL357134.1-201ENST00000445848 426 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 AL353705.4-201ENST00000449661 238 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC1.25□□□□□ -2.21
CXCL1P09341 FABP5P13-201ENST00000452144 328 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC1.25□□□□□ -2.21
CXCL1P09341 AC005410.1-202ENST00000460347 485 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 AC027575.1-201ENST00000481064 460 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 RPL38P4-201ENST00000502376 214 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC1.25□□□□□ -2.21
CXCL1P09341 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.25□□□□□ -2.21
CXCL1P09341 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.25□□□□□ -2.21
CXCL1P09341 MIR4255-201ENST00000579351 72 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.25□□□□□ -2.21
CXCL1P09341 AC126118.1-201ENST00000607744 628 ntBASIC1.25□□□□□ -2.21
CXCL1P09341 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC1.24□□□□□ -2.21
CXCL1P09341 RNU1-72P-201ENST00000362976 153 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 RNU6-778P-201ENST00000363269 103 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.24□□□□□ -2.21
CXCL1P09341 MIR9-3-201ENST00000385084 90 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.24□□□□□ -2.21
CXCL1P09341 RNA5SP212-201ENST00000391223 107 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 RNU6-516P-201ENST00000411381 104 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.24□□□□□ -2.21
CXCL1P09341 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCL1P09341 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCL1P09341 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.24□□□□□ -2.21
CXCL1P09341 AC092393.1-201ENST00000439625 742 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 MTND6P13-201ENST00000443510 523 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 MOB1AP2-201ENST00000446060 614 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 AC005297.2-201ENST00000450430 606 ntBASIC1.24□□□□□ -2.21
CXCL1P09341 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.24□□□□□ -2.21
CXCL1P09341 AC091860.1-201ENST00000505723 432 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms