Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 HESX1-202ENST00000473921 757 ntTSL 5 BASIC1.21□□□□□ -2.22
POLR1AO95602 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.21□□□□□ -2.22
POLR1AO95602 MIR4711-201ENST00000578274 70 ntBASIC1.21□□□□□ -2.22
POLR1AO95602 MIR4287-201ENST00000579398 78 ntBASIC1.21□□□□□ -2.22
POLR1AO95602 AC113194.1-201ENST00000606037 500 ntBASIC1.21□□□□□ -2.22
POLR1AO95602 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
POLR1AO95602 AC009812.4-201ENST00000569134 1805 ntBASIC1.21□□□□□ -2.22
POLR1AO95602 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC1.2□□□□□ -2.22
POLR1AO95602 AL139397.2-201ENST00000404529 772 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 TPMTP4-201ENST00000450749 678 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 RPL31P41-201ENST00000477967 372 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 AC110792.2-201ENST00000510278 224 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
POLR1AO95602 BNIP3P7-201ENST00000605641 516 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC1.2□□□□□ -2.22
POLR1AO95602 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC1.2□□□□□ -2.22
POLR1AO95602 TATDN1P1-201ENST00000414123 891 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 MRPL35P3-201ENST00000421557 364 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 RPS24P6-201ENST00000452670 400 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 RPL30P5-201ENST00000494923 336 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
POLR1AO95602 AC004062.1-201ENST00000509926 645 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 AC093752.1-206ENST00000511823 336 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 AC036111.3-201ENST00000526389 112 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 GAS5-AS1-201ENST00000602767 694 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 AL161423.1-201ENST00000613700 262 ntBASIC1.2□□□□□ -2.22
POLR1AO95602 AC025263.3-201ENST00000622965 1396 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 RNU6-670P-201ENST00000364312 104 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.19□□□□□ -2.22
POLR1AO95602 NUP35P2-201ENST00000416748 943 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 RNU7-26P-201ENST00000458980 63 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 AC097493.1-201ENST00000463958 372 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 AC133963.2-201ENST00000513686 578 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 RNU6-970P-201ENST00000516312 107 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
POLR1AO95602 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC1.19□□□□□ -2.22
POLR1AO95602 AC069304.3-201ENST00000603938 1084 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 MIR2909-201ENST00000617113 69 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 AC139769.3-201ENST00000618383 175 ntBASIC1.19□□□□□ -2.22
POLR1AO95602 CBX3P1-201ENST00000325243 554 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 SNORA3A-201ENST00000364113 130 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 RNA5SP193-201ENST00000410353 107 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 RPL27AP8-201ENST00000424277 446 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 AC023347.2-201ENST00000433994 462 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC1.18□□□□□ -2.22
POLR1AO95602 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.18□□□□□ -2.22
POLR1AO95602 RNA5SP121-201ENST00000516537 101 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 AP003717.3-201ENST00000544832 1180 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.18□□□□□ -2.22
POLR1AO95602 AC023824.2-201ENST00000566185 400 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 AGGF1P5-201ENST00000567900 919 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 MIR3117-201ENST00000584034 78 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC1.18□□□□□ -2.22
POLR1AO95602 AL161629.2-201ENST00000615347 275 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 AC011472.4-201ENST00000615848 491 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 FAM157B-203ENST00000639350 358 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 UBE2FP1-201ENST00000416536 447 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.18□□□□□ -2.22
POLR1AO95602 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC1.18□□□□□ -2.22
POLR1AO95602 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC1.18□□□□□ -2.22
POLR1AO95602 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.18□□□□□ -2.22
POLR1AO95602 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
POLR1AO95602 AC005786.1-201ENST00000588553 154 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 AC005498.1-201ENST00000592125 465 ntBASIC1.18□□□□□ -2.22
POLR1AO95602 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC1.18□□□□□ -2.22
POLR1AO95602 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
POLR1AO95602 OR4G2P-201ENST00000328113 903 ntBASIC1.17□□□□□ -2.22
POLR1AO95602 RNU6ATAC27P-201ENST00000408289 119 ntBASIC1.17□□□□□ -2.22
POLR1AO95602 RNU6-193P-201ENST00000410977 107 ntBASIC1.17□□□□□ -2.22
POLR1AO95602 AL358176.2-201ENST00000425769 204 ntBASIC1.17□□□□□ -2.22
POLR1AO95602 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC1.17□□□□□ -2.22
POLR1AO95602 SUMO2P2-201ENST00000456482 255 ntBASIC1.17□□□□□ -2.22
POLR1AO95602 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
POLR1AO95602 AC133485.1-201ENST00000567176 124 ntBASIC1.17□□□□□ -2.22
POLR1AO95602 AC138907.6-201ENST00000568401 126 ntBASIC1.17□□□□□ -2.22
POLR1AO95602 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.17□□□□□ -2.22
POLR1AO95602 DUXAP11-201ENST00000603858 526 ntBASIC1.17□□□□□ -2.22
POLR1AO95602 AL592148.2-201ENST00000612210 372 ntBASIC1.17□□□□□ -2.22
POLR1AO95602 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC1.17□□□□□ -2.22
POLR1AO95602 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC1.17□□□□□ -2.22
POLR1AO95602 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.16□□□□□ -2.22
POLR1AO95602 RNU6-317P-201ENST00000384031 107 ntBASIC1.16□□□□□ -2.22
POLR1AO95602 ARL2BPP3-201ENST00000421226 480 ntBASIC1.16□□□□□ -2.22
POLR1AO95602 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.16□□□□□ -2.22
POLR1AO95602 AC079776.3-201ENST00000450665 370 ntBASIC1.16□□□□□ -2.22
POLR1AO95602 CABYRP1-201ENST00000465493 1045 ntBASIC1.16□□□□□ -2.22
POLR1AO95602 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC1.16□□□□□ -2.22
POLR1AO95602 C5orf46-203ENST00000515291 573 ntAPPRIS ALT1 TSL 1 (best) BASIC1.16□□□□□ -2.22
POLR1AO95602 COX6CP3-201ENST00000580869 223 ntBASIC1.16□□□□□ -2.22
POLR1AO95602 AC090616.3-201ENST00000582184 217 ntBASIC1.16□□□□□ -2.22
POLR1AO95602 AC084373.1-201ENST00000603311 235 ntBASIC1.16□□□□□ -2.22
POLR1AO95602 AC109454.4-201ENST00000623411 649 ntBASIC1.16□□□□□ -2.22
POLR1AO95602 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.16□□□□□ -2.22
POLR1AO95602 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.16□□□□□ -2.22
POLR1AO95602 AC008163.1-202ENST00000636004 2889 ntBASIC1.15□□□□□ -2.22
POLR1AO95602 HNRNPDP2-201ENST00000406475 478 ntBASIC1.15□□□□□ -2.22
POLR1AO95602 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC1.15□□□□□ -2.22
POLR1AO95602 AC244453.4-201ENST00000419150 388 ntBASIC1.15□□□□□ -2.22
POLR1AO95602 AC246680.2-201ENST00000422106 389 ntBASIC1.15□□□□□ -2.22
POLR1AO95602 AC244035.1-201ENST00000430042 390 ntBASIC1.15□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms