Protein–RNA interactions for Protein: Q9UJV9

DDX41, Probable ATP-dependent RNA helicase DDX41, humanhuman

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41Q9UJV9 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 RPL7P43-201ENST00000478876 753 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 RPL31P13-201ENST00000484151 370 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AL160314.1-201ENST00000490836 438 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC099522.1-202ENST00000514718 367 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 RNU6-1170P-201ENST00000515974 106 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 RNU6-1069P-201ENST00000516612 133 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC069113.1-201ENST00000517763 267 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 OR8R1P-201ENST00000543943 764 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC106785.1-201ENST00000565935 262 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 FRG2DP-202ENST00000566967 323 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC138761.3-201ENST00000579993 334 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 MIR5692C1-201ENST00000585309 91 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 Z98200.1-201ENST00000607298 470 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 MIR6867-201ENST00000610636 67 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC112484.5-201ENST00000624189 228 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 Z99571.1-201ENST00000636677 394 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 AC008013.2-202ENST00000637965 364 ntBASIC4.84□□□□□ -1.63
DDX41Q9UJV9 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.84□□□□□ -1.64
DDX41Q9UJV9 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
DDX41Q9UJV9 ZNF285B-201ENST00000561698 1767 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AC008568.2-201ENST00000623862 2313 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 SPRR2C-201ENST00000290702 219 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 MIR372-201ENST00000362225 67 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 RNU6-371P-201ENST00000364283 108 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 SNORD116-11-201ENST00000383882 92 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 RNU6-1227P-201ENST00000383981 107 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AL355989.1-202ENST00000419406 408 ntTSL 3 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 RPL7P28-201ENST00000437739 740 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 VN1R17P-201ENST00000472048 1090 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 RPS27P27-201ENST00000498779 255 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 SLC25A15P5-201ENST00000508033 253 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 RN7SKP24-201ENST00000515888 284 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 MIR2114-201ENST00000516645 80 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 RNA5SP471-201ENST00000516971 106 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AC087854.1-201ENST00000519706 414 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 RNU6-323P-201ENST00000521915 107 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AL352979.3-201ENST00000553515 247 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 RPL23AP97-201ENST00000568955 471 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AC116096.1-201ENST00000566804 2314 ntBASIC4.83□□□□□ -1.64
DDX41Q9UJV9 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.83□□□□□ -1.64
DDX41Q9UJV9 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 PNPT1P2-201ENST00000456768 2050 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 RNU6-600P-201ENST00000362524 99 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 RNA5SP322-201ENST00000363617 119 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 RN7SKP280-201ENST00000364196 304 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 AL139397.2-201ENST00000404529 772 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 PPIAP31-201ENST00000405422 495 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 RN7SKP158-201ENST00000410453 326 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 CYP4F29P-201ENST00000420685 446 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 SNORA70.16-201ENST00000516390 95 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 COPS8P3-201ENST00000526024 482 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 AP004242.1-201ENST00000533701 349 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 ANP32BP3-201ENST00000559213 706 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 MIR1273C-201ENST00000578669 77 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 AL161798.1-201ENST00000604630 131 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 MIR432-201ENST00000606207 94 ntBASIC4.82□□□□□ -1.64
DDX41Q9UJV9 TEX41-265ENST00000627785 704 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.82□□□□□ -1.64
DDX41Q9UJV9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.81□□□□□ -1.64
DDX41Q9UJV9 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX41Q9UJV9 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.81□□□□□ -1.64
DDX41Q9UJV9 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.81□□□□□ -1.64
DDX41Q9UJV9 RNU6-562P-201ENST00000362731 107 ntBASIC4.81□□□□□ -1.64
DDX41Q9UJV9 Y_RNA.245-201ENST00000364493 95 ntBASIC4.81□□□□□ -1.64
DDX41Q9UJV9 RNU1-64P-201ENST00000365443 163 ntBASIC4.81□□□□□ -1.64
DDX41Q9UJV9 RNA5SP283-201ENST00000365604 119 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 182 ms