Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 AC008277.2-201ENST00000605196 797 ntBASIC3.32□□□□□ -1.88
SIX4Q9UIU6 AC009161.2-201ENST00000624626 138 ntBASIC3.32□□□□□ -1.88
SIX4Q9UIU6 AC019226.1-201ENST00000625666 515 ntBASIC3.32□□□□□ -1.88
SIX4Q9UIU6 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC3.32□□□□□ -1.88
SIX4Q9UIU6 MIR7153-201ENST00000637758 57 ntBASIC3.32□□□□□ -1.88
SIX4Q9UIU6 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SIX4Q9UIU6 CR848007.1-201ENST00000442354 1699 ntBASIC3.32□□□□□ -1.88
SIX4Q9UIU6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SIX4Q9UIU6 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
SIX4Q9UIU6 OR56A3-203ENST00000641160 4438 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC004520.1-201ENST00000608362 1413 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 SNORD56.2-201ENST00000363242 71 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 RNY4P14-201ENST00000363656 96 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 RNU6-108P-201ENST00000365558 107 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 Y_RNA.390-201ENST00000383932 102 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 Y_RNA.453-201ENST00000384223 109 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 MIR1-2-201ENST00000384961 85 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 RNU6-278P-201ENST00000390945 109 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 RNU6-754P-201ENST00000391166 107 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC110754.1-201ENST00000399740 601 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 RNU2-9P-201ENST00000410194 145 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 RN7SKP220-201ENST00000410611 288 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 RNU2-62P-201ENST00000410868 191 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 TOMM22P1-201ENST00000418578 312 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC137499.1-201ENST00000427602 88 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC079780.1-201ENST00000428259 207 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 MTATP6P23-201ENST00000440153 476 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AL662791.1-201ENST00000441992 928 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 RPL23AP20-201ENST00000447965 421 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 NFU1P2-201ENST00000448700 469 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 VN1R17P-201ENST00000472048 1090 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 RPS15AP36-201ENST00000492022 382 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC116353.2-201ENST00000505332 712 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC103783.1-201ENST00000520506 373 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AP003034.1-201ENST00000534621 422 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 ARL2BPP2-201ENST00000550907 489 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC068135.2-201ENST00000569293 1028 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 MIR4325-201ENST00000583049 90 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC007363.1-201ENST00000604736 620 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AP001330.5-201ENST00000607176 411 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC104458.1-201ENST00000608243 463 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AL591516.1-201ENST00000611326 274 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AL450472.3-201ENST00000615578 367 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 PLCE1P1-201ENST00000622094 305 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 AC091953.5-201ENST00000622919 233 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
SIX4Q9UIU6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.31□□□□□ -1.88
SIX4Q9UIU6 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 Y_RNA.22-201ENST00000362492 102 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 U3.11-201ENST00000364476 212 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 RNU6-483P-201ENST00000384088 108 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 SNORA48.2-201ENST00000390926 124 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 AL109755.1-201ENST00000401791 649 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 RPS4XP8-201ENST00000402039 771 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 RNU2-43P-201ENST00000410306 190 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 RNU2-36P-201ENST00000410361 191 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 UBE2FP1-201ENST00000416536 447 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 RPL31P12-201ENST00000422587 358 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 MTCO1P20-201ENST00000425366 358 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 RPL35AP22-201ENST00000436855 335 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 CYCSP32-201ENST00000440548 321 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 FDX1P2-201ENST00000450769 375 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 RNU6-420P-201ENST00000458780 107 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 AC069439.1-201ENST00000494739 167 ntBASIC3.3□□□□□ -1.88
SIX4Q9UIU6 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.3□□□□□ -1.88
SIX4Q9UIU6 AP004371.1-201ENST00000525240 214 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms