Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MIR8081-201ENST00000611533 95 ntBASIC1.86□□□□□ -2.11
TRIM4Q9C037 AL589994.2-201ENST00000621124 579 ntBASIC1.86□□□□□ -2.11
TRIM4Q9C037 AC116618.1-201ENST00000634617 774 ntBASIC1.86□□□□□ -2.11
TRIM4Q9C037 RNU6-619P-201ENST00000365146 108 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM4Q9C037 BEND7P1-201ENST00000422058 457 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AL356867.1-201ENST00000429623 299 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.85□□□□□ -2.11
TRIM4Q9C037 MOB1AP2-201ENST00000446060 614 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM4Q9C037 KLF3P2-201ENST00000465138 268 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC1.85□□□□□ -2.11
TRIM4Q9C037 AC109471.1-201ENST00000511631 612 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AC092436.3-201ENST00000511788 257 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 SNORA48.10-201ENST00000516965 160 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AP005902.1-201ENST00000521358 186 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AC087465.1-201ENST00000560574 245 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 HMGN2P15-201ENST00000585707 270 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AC025165.5-201ENST00000602802 578 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AL450336.1-201ENST00000605180 586 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC1.85□□□□□ -2.11
TRIM4Q9C037 AC068057.2-201ENST00000624047 895 ntBASIC1.85□□□□□ -2.11
TRIM4Q9C037 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRIM4Q9C037 AL590383.1-201ENST00000428602 75 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC1.84□□□□□ -2.11
TRIM4Q9C037 Z80107.1-201ENST00000436830 412 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM4Q9C037 RPL23AP76-201ENST00000441860 458 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 CDC42P1-201ENST00000456658 548 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 RPL7P18-201ENST00000478965 734 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.84□□□□□ -2.11
TRIM4Q9C037 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM4Q9C037 RNU6ATAC13P-201ENST00000516152 131 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM4Q9C037 AC022880.1-201ENST00000534017 973 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 SNHG1-210ENST00000539303 240 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM4Q9C037 AL391261.3-201ENST00000557194 520 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 SULT1C2P1-202ENST00000562418 459 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 MIR4287-201ENST00000579398 78 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC1.84□□□□□ -2.11
TRIM4Q9C037 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
TRIM4Q9C037 MIR6734-201ENST00000621166 68 ntBASIC1.84□□□□□ -2.11
TRIM4Q9C037 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM4Q9C037 SGO1P1-201ENST00000603525 1447 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 ZNF355P-201ENST00000427301 3216 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 RNU5A-1-201ENST00000362698 116 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 RNU6-251P-201ENST00000363235 104 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 RNA5SP363-201ENST00000365072 115 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 RNU1-57P-201ENST00000384491 166 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 Y_RNA.540-201ENST00000384638 111 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 MIR16-1-201ENST00000385271 89 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
TRIM4Q9C037 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM4Q9C037 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC1.83□□□□□ -2.12
TRIM4Q9C037 FO393414.1-201ENST00000428697 1184 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC1.83□□□□□ -2.12
TRIM4Q9C037 ANKRD20A9P-201ENST00000457997 2978 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 DYNLL1P5-201ENST00000467158 270 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 AC034222.1-201ENST00000494052 532 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM4Q9C037 FAM92A1P1-201ENST00000528023 890 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 AP002748.2-201ENST00000528671 348 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC1.83□□□□□ -2.12
TRIM4Q9C037 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM4Q9C037 AC093510.2-201ENST00000562820 896 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 SUB1P3-201ENST00000564581 315 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.83□□□□□ -2.12
TRIM4Q9C037 MIR4303-201ENST00000581299 66 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC1.83□□□□□ -2.12
TRIM4Q9C037 AL078603.1-201ENST00000603824 313 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 AC021749.1-201ENST00000604322 607 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 MIR1264-201ENST00000616374 69 ntBASIC1.83□□□□□ -2.12
TRIM4Q9C037 WWP1P1-201ENST00000466609 2769 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRIM4Q9C037 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
TRIM4Q9C037 RNU4-42P-201ENST00000364738 142 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 RNU6-997P-201ENST00000384725 107 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 AL139098.1-201ENST00000407291 389 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 FCF1P2-201ENST00000415284 583 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 AL109913.1-201ENST00000421173 514 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 PSMA6P3-201ENST00000428242 164 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC1.82□□□□□ -2.12
TRIM4Q9C037 AL049734.2-201ENST00000441066 616 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM4Q9C037 SNRPFP4-201ENST00000456366 242 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 LARP1BP2-201ENST00000486594 519 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 AC114786.4-201ENST00000508771 728 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 AC023141.11-201ENST00000508864 202 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 AC114797.1-201ENST00000514003 728 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 RNU5F-8P-201ENST00000515941 111 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 RNU2-19P-201ENST00000517288 84 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM4Q9C037 HSBP1P1-201ENST00000555205 166 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC1.82□□□□□ -2.12
TRIM4Q9C037 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM4Q9C037 AC040174.2-201ENST00000602701 465 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 AC025588.2-201ENST00000604851 466 ntBASIC1.82□□□□□ -2.12
TRIM4Q9C037 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC1.82□□□□□ -2.12
TRIM4Q9C037 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms