Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 AC104027.1-201ENST00000521887 300 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 ARL2BPP2-201ENST00000550907 489 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC005476.1-201ENST00000554427 397 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 RPS3AP4-201ENST00000555161 764 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC006362.1-201ENST00000567392 174 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL670379.6-201ENST00000603753 252 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL670379.11-201ENST00000604059 253 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC008162.1-201ENST00000604718 254 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL670379.1-201ENST00000604752 252 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC064872.1-201ENST00000604823 1072 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL670379.5-201ENST00000605253 252 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL670379.12-201ENST00000605291 253 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL670379.8-201ENST00000605353 252 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL670379.7-201ENST00000605823 252 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AL157817.1-201ENST00000614264 790 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC009509.4-201ENST00000619202 509 ntBASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
NUP54Q7Z3B4 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 MTND5P1-201ENST00000445440 1375 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 HSPE1P11-201ENST00000339579 310 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 RNY4P34-201ENST00000364779 95 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 RNU6-1180P-201ENST00000364935 107 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 RNVU1-14-201ENST00000384770 164 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 MIR627-201ENST00000384979 97 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 RNU2-36P-201ENST00000410361 191 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 RNA5SP293-201ENST00000410527 113 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 RNA5SP120-201ENST00000410900 112 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 RAC1P6-201ENST00000423911 575 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 AC005326.1-201ENST00000429197 123 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 AC007919.1-201ENST00000429380 217 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 FCF1P1-201ENST00000432690 571 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 AL031667.1-201ENST00000440222 725 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 AC244505.5-201ENST00000443639 207 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 DDX3P2-201ENST00000446138 111 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 AC013267.1-201ENST00000458227 267 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 AC114786.4-201ENST00000508771 728 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 SNORA18.6-201ENST00000516792 115 ntBASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
NUP54Q7Z3B4 AL137003.2-201ENST00000606924 2538 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 SNORD46.1-201ENST00000364139 104 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RNU5E-6P-201ENST00000365574 115 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RNU6-348P-201ENST00000384386 107 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RPL21P75-201ENST00000396599 483 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RPL21P28-201ENST00000401418 483 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AL592114.1-201ENST00000403842 483 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 NDUFS5P1-201ENST00000405668 289 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RNA5SP44-201ENST00000410446 133 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 CDK8P2-201ENST00000415020 547 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 ELOCP4-201ENST00000420090 333 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC007283.2-201ENST00000424739 197 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC104850.1-201ENST00000435940 476 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AL353706.1-201ENST00000436728 494 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC006028.1-201ENST00000438379 402 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC073614.1-201ENST00000438690 650 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AL136380.1-201ENST00000447970 162 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AL590639.1-201ENST00000456484 337 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RPL21P39-201ENST00000463605 483 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RPL31P41-201ENST00000477967 372 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 KC877373.1-201ENST00000479066 408 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RPL21P93-201ENST00000480465 489 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RN7SL432P-201ENST00000484057 298 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC087190.1-201ENST00000484462 480 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC093591.1-201ENST00000491435 481 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 RPL21P16-201ENST00000495531 483 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC079140.3-201ENST00000511111 550 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 Vault.3-201ENST00000516676 95 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC022634.1-201ENST00000520765 532 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AP002963.1-201ENST00000530590 184 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 HSPE1P20-201ENST00000538133 289 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC024909.2-201ENST00000553035 286 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AC025281.1-201ENST00000567026 265 ntBASIC3.01□□□□□ -1.93
NUP54Q7Z3B4 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms