Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.13□□□□□ -1.75
LONRF3Q496Y0 TNPO1P3-201ENST00000436471 2662 ntBASIC4.13□□□□□ -1.75
LONRF3Q496Y0 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LONRF3Q496Y0 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.13□□□□□ -1.75
LONRF3Q496Y0 AL079305.1-201ENST00000623159 3008 ntBASIC4.13□□□□□ -1.75
LONRF3Q496Y0 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
LONRF3Q496Y0 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.13□□□□□ -1.75
LONRF3Q496Y0 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 SNORD56.2-201ENST00000363242 71 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 RNA5SP51-201ENST00000364750 119 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 RNU6-877P-201ENST00000383868 107 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 RNU6-39P-201ENST00000384344 107 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 MIR1-2-201ENST00000384961 85 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 RNU2-9P-201ENST00000410194 145 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 RPS29P4-201ENST00000414733 161 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AL512844.2-201ENST00000433990 593 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC079781.2-201ENST00000446424 169 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC010631.1-201ENST00000474150 156 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 RPL36AP51-201ENST00000487216 318 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 RNU6-410P-201ENST00000517006 107 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC004024.1-201ENST00000549244 247 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC093012.1-202ENST00000549403 582 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 GLUD1P4-201ENST00000590914 418 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 BNIP3P30-201ENST00000601184 574 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AL162413.1-201ENST00000603198 110 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AL020991.1-201ENST00000612314 373 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AC005609.4-201ENST00000625071 447 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 AL732372.2-225ENST00000642124 456 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 ZNF826P-207ENST00000622273 1910 ntBASIC4.12□□□□□ -1.75
LONRF3Q496Y0 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
LONRF3Q496Y0 ZNF680P1-201ENST00000436625 1469 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 Y_RNA.38-201ENST00000362617 102 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 RNA5SP119-201ENST00000362715 117 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 U3.11-201ENST00000364476 212 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 MIR7-3-201ENST00000384898 110 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 RPL30P2-201ENST00000414021 291 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 TRIAP1P1-201ENST00000427062 225 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 USP12PX-201ENST00000432383 1057 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 TAAR7P-201ENST00000436141 242 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 HSPD1P21-201ENST00000436541 245 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC022364.2-201ENST00000457963 554 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC083798.1-201ENST00000472671 131 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 RPS29P25-201ENST00000481709 171 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 RNU6-358P-201ENST00000516564 75 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 RNA5SP291-201ENST00000517222 105 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC011979.2-201ENST00000527568 352 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 DNAJC8P1-201ENST00000554535 372 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC034105.3-201ENST00000565294 442 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AC092794.2-201ENST00000620933 563 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AL357559.1-201ENST00000622228 274 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
LONRF3Q496Y0 CEP170P1-201ENST00000502249 4587 ntBASIC4.11□□□□□ -1.75
LONRF3Q496Y0 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 RNU6-74P-201ENST00000384235 107 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 MIR23A-201ENST00000385245 73 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 SNORA11.1-201ENST00000408133 129 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 RNU6-908P-201ENST00000410160 94 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 AC138393.2-201ENST00000414742 246 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 BTF3L4P3-201ENST00000418879 476 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC4.1□□□□□ -1.75
LONRF3Q496Y0 AL606489.2-201ENST00000433886 234 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 BNIP3P2-201ENST00000441221 577 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 PRSS3P4-201ENST00000453323 162 ntBASIC4.1□□□□□ -1.75
LONRF3Q496Y0 AL031183.1-201ENST00000457667 207 ntBASIC4.1□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 214.3 ms