Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 RPL23AP41-201ENST00000484754 458 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA4P78363 AC242628.1-201ENST00000606810 391 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 uc_338.12-201ENST00000616344 181 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
ABCA4P78363 AC091895.1-201ENST00000624494 256 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 RNU6-997P-201ENST00000384725 107 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 MIR320A-201ENST00000385302 82 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 STAT4-203ENST00000409995 709 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA4P78363 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCA4P78363 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCA4P78363 AC090774.1-201ENST00000435925 246 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 SUMO2P6-201ENST00000505273 288 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 SNORA48.10-201ENST00000516965 160 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCA4P78363 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.19□□□□□ -2.22
ABCA4P78363 CR383656.7-201ENST00000548164 174 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC1.19□□□□□ -2.22
ABCA4P78363 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC1.19□□□□□ -2.22
ABCA4P78363 ANP32BP3-201ENST00000559213 706 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA4P78363 AC135507.1-201ENST00000607214 561 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 AC009318.4-201ENST00000620496 486 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC1.19□□□□□ -2.22
ABCA4P78363 AL356585.4-201ENST00000623078 1229 ntBASIC1.19□□□□□ -2.22
ABCA4P78363 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
ABCA4P78363 AC130650.2-201ENST00000618736 2403 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AL365496.1-201ENST00000426885 215 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC1.18□□□□□ -2.22
ABCA4P78363 AC004383.1-201ENST00000438135 289 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 DPPA3P1-201ENST00000448050 469 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC1.18□□□□□ -2.22
ABCA4P78363 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.18□□□□□ -2.22
ABCA4P78363 RNU6-1282P-201ENST00000516735 96 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 OR5AK1P-201ENST00000524837 922 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.18□□□□□ -2.22
ABCA4P78363 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC1.18□□□□□ -2.22
ABCA4P78363 AC068135.2-201ENST00000569293 1028 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC1.18□□□□□ -2.22
ABCA4P78363 AC025016.1-201ENST00000616746 682 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AC018926.3-201ENST00000618841 406 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AC009950.2-201ENST00000636548 183 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
ABCA4P78363 Y_RNA.393-201ENST00000383936 102 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 RNU6-1080P-201ENST00000383982 107 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 USP12PX-201ENST00000432383 1057 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.18□□□□□ -2.22
ABCA4P78363 Z85994.2-201ENST00000434327 452 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AL136380.1-201ENST00000447970 162 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 HMGN2P18-201ENST00000450680 270 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.18□□□□□ -2.22
ABCA4P78363 AC092757.1-201ENST00000467293 467 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AC023141.11-201ENST00000508864 202 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 RNU5A-7P-201ENST00000515979 116 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC1.18□□□□□ -2.22
ABCA4P78363 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC1.18□□□□□ -2.22
ABCA4P78363 CASP1P1-201ENST00000526345 212 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AP000907.2-201ENST00000530827 353 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.18□□□□□ -2.22
ABCA4P78363 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC1.18□□□□□ -2.22
ABCA4P78363 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC1.18□□□□□ -2.22
ABCA4P78363 MIR5000-201ENST00000577717 103 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 AC011477.1-204ENST00000623416 1325 ntBASIC1.18□□□□□ -2.22
ABCA4P78363 SNORA46.1-201ENST00000391069 153 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA4P78363 RNU7-23P-201ENST00000459465 62 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AC015724.1-201ENST00000478577 156 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 SUMO1P1-201ENST00000497904 306 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 RNU4ATAC10P-201ENST00000516967 122 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 RNU1-92P-201ENST00000517017 135 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA4P78363 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.17□□□□□ -2.22
ABCA4P78363 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.17□□□□□ -2.22
ABCA4P78363 AC005498.1-201ENST00000592125 465 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 uc_338.20-201ENST00000621563 178 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC1.17□□□□□ -2.22
ABCA4P78363 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ABCA4P78363 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
ABCA4P78363 AC010329.5-201ENST00000623497 2174 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AC008555.8-201ENST00000623602 2168 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AC009541.1-201ENST00000438279 2662 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 RNU6-819P-201ENST00000364116 107 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 MIR758-201ENST00000390227 88 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 BEND7P1-201ENST00000422058 457 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AL035410.1-201ENST00000427409 427 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AL356867.1-201ENST00000429623 299 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 BMI1P1-201ENST00000445879 941 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 MTATP6P7-201ENST00000453315 681 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.17□□□□□ -2.22
ABCA4P78363 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC1.17□□□□□ -2.22
ABCA4P78363 AL049714.1-201ENST00000466686 347 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 CBX3P3-201ENST00000508108 532 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 SNORA31.18-201ENST00000517043 134 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 SNORA31.24-201ENST00000517232 57 ntBASIC1.17□□□□□ -2.22
ABCA4P78363 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA4P78363 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC1.17□□□□□ -2.22
ABCA4P78363 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC1.17□□□□□ -2.22
ABCA4P78363 MTATP6P3-201ENST00000581686 676 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 125.2 ms