Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 MTCO2P27-201ENST00000420740 428 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AL159987.2-201ENST00000432754 307 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113P62684 AC004866.2-201ENST00000438285 481 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AL356535.1-201ENST00000440335 398 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 MTCYBP6-201ENST00000441810 138 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113P62684 AC020550.1-201ENST00000447385 163 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC4.41□□□□□ -1.7
HERVK_113P62684 AC069499.1-201ENST00000489433 509 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 RNU6-1095P-201ENST00000516148 108 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 SNORA70.24-201ENST00000517233 118 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113P62684 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.41□□□□□ -1.7
HERVK_113P62684 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113P62684 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113P62684 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113P62684 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.41□□□□□ -1.7
HERVK_113P62684 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC4.41□□□□□ -1.7
HERVK_113P62684 BNIP3P25-201ENST00000596023 559 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 LLPHP1-201ENST00000603571 367 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.41□□□□□ -1.7
HERVK_113P62684 RNU1-30P-201ENST00000606575 163 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 DUSP12P1-201ENST00000612874 516 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AL450472.3-201ENST00000615578 367 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.41□□□□□ -1.7
HERVK_113P62684 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 AC090971.5-201ENST00000621102 293 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 MTND4LP32-201ENST00000636111 270 ntBASIC4.41□□□□□ -1.7
HERVK_113P62684 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
HERVK_113P62684 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC4.4□□□□□ -1.7
HERVK_113P62684 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
HERVK_113P62684 Y_RNA.132-201ENST00000363421 102 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 RNA5SP322-201ENST00000363617 119 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 SNORA23-201ENST00000365128 182 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
HERVK_113P62684 RNU6-1297P-201ENST00000384415 104 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 Y_RNA.579-201ENST00000390939 94 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 NDUFS5P1-201ENST00000405668 289 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 RNU6-387P-201ENST00000411331 105 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 RNA5SP111-201ENST00000411386 101 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 OFD1P1Y-201ENST00000411756 1225 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113P62684 AC091390.3-201ENST00000426478 338 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 AC005019.1-201ENST00000436455 431 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC4.4□□□□□ -1.71
HERVK_113P62684 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113P62684 GAPDHP27-201ENST00000447427 1020 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113P62684 Y_RNA.635-201ENST00000459041 101 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 RNU7-66P-201ENST00000459469 62 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 MTCO1P29-201ENST00000496868 288 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.4□□□□□ -1.71
HERVK_113P62684 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113P62684 AC093012.1-202ENST00000549403 582 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 AC107016.1-201ENST00000550463 337 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 MEG8-215ENST00000555354 469 ntTSL 3 BASIC4.4□□□□□ -1.71
HERVK_113P62684 AC093249.1-201ENST00000567049 203 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 AC106782.4-201ENST00000568264 210 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 POLR3GP2-201ENST00000588366 668 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.4□□□□□ -1.71
HERVK_113P62684 Z82243.1-201ENST00000609432 473 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 AC084781.2-201ENST00000615568 161 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
HERVK_113P62684 MIR6130-201ENST00000619419 109 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 AC103858.2-201ENST00000621471 543 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC4.4□□□□□ -1.71
HERVK_113P62684 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
HERVK_113P62684 FAM35DP-201ENST00000323387 2712 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.4□□□□□ -1.71
HERVK_113P62684 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
HERVK_113P62684 MTND4P27-201ENST00000450813 1354 ntBASIC4.4□□□□□ -1.71
HERVK_113P62684 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERVK_113P62684 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
HERVK_113P62684 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERVK_113P62684 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERVK_113P62684 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
HERVK_113P62684 RNU6-1155P-201ENST00000363554 107 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 U3.12-201ENST00000364498 214 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 Y_RNA.315-201ENST00000365117 102 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 RNU6-356P-201ENST00000384140 107 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 RNU1-89P-201ENST00000384592 164 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 MIR124-3-201ENST00000384866 87 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
HERVK_113P62684 RNU6-837P-201ENST00000391056 108 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 MIR548F5-201ENST00000408421 86 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 POLHP1-201ENST00000411806 470 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC4.39□□□□□ -1.71
HERVK_113P62684 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.39□□□□□ -1.71
HERVK_113P62684 AC087650.1-201ENST00000431445 468 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.39□□□□□ -1.71
HERVK_113P62684 SCARNA18-201ENST00000459004 134 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 snoU13.3-201ENST00000459441 104 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC4.39□□□□□ -1.71
HERVK_113P62684 VN1R17P-201ENST00000472048 1090 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC4.39□□□□□ -1.71
HERVK_113P62684 RNU6-1170P-201ENST00000515974 106 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 RNU6-123P-201ENST00000516163 102 ntBASIC4.39□□□□□ -1.71
HERVK_113P62684 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC4.39□□□□□ -1.71
HERVK_113P62684 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms