Protein–RNA interactions for Protein: A6NDZ8

MBD3L4, Putative methyl-CpG-binding domain protein 3-like 4, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L4A6NDZ8 RPL21P109-201ENST00000422213 475 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AL353678.1-201ENST00000422735 741 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC018644.1-201ENST00000429934 551 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AL365400.1-201ENST00000431854 640 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 GOT2P5-201ENST00000433995 546 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 SNRPEP9-201ENST00000436794 238 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 IFNA20P-201ENST00000436840 528 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC093019.1-201ENST00000443135 252 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 GAS5-223ENST00000452197 483 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 SNORA19.2-201ENST00000516013 114 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 RNU6-1282P-201ENST00000516735 96 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC090115.3-201ENST00000553218 849 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 MIR5685-201ENST00000579080 79 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 MIR3944-201ENST00000581277 108 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC091135.1-201ENST00000585943 307 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC005498.1-201ENST00000592125 465 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC073539.2-201ENST00000597113 165 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC103705.1-201ENST00000619013 241 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC039056.2-201ENST00000622261 511 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 AC099654.5-201ENST00000636479 350 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 Z82217.1-201ENST00000625157 8149 ntBASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.58□□□□□ -1.84
MBD3L4A6NDZ8 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 FTLP6-201ENST00000355274 422 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 SNORD35B-201ENST00000363660 87 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 Y_RNA.167-201ENST00000363735 109 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 U3.12-201ENST00000364498 214 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 RNU6-1303P-201ENST00000364841 107 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 Y_RNA.414-201ENST00000384011 101 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 EIF4E2P1-201ENST00000393781 255 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 RPS4XP3-201ENST00000398541 413 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 HDGFP1-201ENST00000405943 252 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 RAP1BP3-201ENST00000407180 549 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 RPLP0P7-201ENST00000416050 667 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 MTCO3P46-201ENST00000425787 232 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AL445584.1-201ENST00000431451 330 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 RANP8-201ENST00000444720 713 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 RN7SL271P-201ENST00000487601 295 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 MTND3P25-201ENST00000509243 135 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC008716.1-201ENST00000511084 513 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 RN7SKP256-201ENST00000517201 314 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 SCOCP1-201ENST00000554676 349 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC103710.3-201ENST00000608157 948 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 5S_rRNA.16-201ENST00000612928 119 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC002076.2-201ENST00000617362 122 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC104985.2-201ENST00000620598 500 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AL354798.1-201ENST00000622505 329 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC099506.2-201ENST00000623074 221 ntBASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC3.57□□□□□ -1.84
MBD3L4A6NDZ8 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 Y_RNA.166-201ENST00000363730 102 ntBASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 SNORD113-7-201ENST00000363762 77 ntBASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 RN7SKP32-201ENST00000410167 303 ntBASIC3.56□□□□□ -1.84
MBD3L4A6NDZ8 MTND3P8-201ENST00000412909 339 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms