Protein–RNA interactions for Protein: A0A0B4J280

TRAV40, T-cell receptor alpha variable 40 (Fragment), humanhuman

Predictions only

Length 105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40A0A0B4J280 AC079089.3-201ENST00000603094 673 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 U73023.1-201ENST00000603134 700 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC013553.2-201ENST00000604244 589 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC136601.2-201ENST00000604356 474 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 BX664608.1-201ENST00000610519 487 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC122133.1-201ENST00000613964 233 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 DLEU1_2.1-201ENST00000617920 342 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC079416.3-201ENST00000624479 549 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AL159972.1-201ENST00000625150 448 ntBASIC2□□□□□ -2.09
TRAV40A0A0B4J280 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC2□□□□□ -2.09
TRAV40A0A0B4J280 AC233263.6-201ENST00000631132 1963 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 OFD1P6Y-202ENST00000451061 2724 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC011460.1-201ENST00000636268 1834 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 U8.2-201ENST00000363156 134 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 RNU6-173P-201ENST00000364215 104 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 SNORA70B-201ENST00000384210 135 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 RNA5SP181-201ENST00000410246 98 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 RNU6-516P-201ENST00000411381 104 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 RPL23AP39-201ENST00000415533 405 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC009518.2-201ENST00000418056 731 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AL365203.2-201ENST00000423444 196 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 RPL27AP8-201ENST00000424277 446 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 MTCYBP39-201ENST00000437562 491 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 UBE2D3P4-201ENST00000441973 436 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AL135752.1-201ENST00000479477 471 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC008549.1-201ENST00000512900 643 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 SNORA31.15-201ENST00000516771 132 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AP003181.2-201ENST00000528941 181 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 ZDHHC20P3-201ENST00000531576 336 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC060766.3-201ENST00000591442 263 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AL133393.1-201ENST00000603277 287 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 DPPA3P3-201ENST00000603842 430 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC008962.1-201ENST00000605729 304 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AL390240.1-201ENST00000612950 384 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC010297.1-201ENST00000623948 149 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC091965.5-201ENST00000624785 342 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AC097655.1-201ENST00000635075 318 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 CU459211.1-201ENST00000635667 749 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 OR5H6-203ENST00000642105 978 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.99□□□□□ -2.09
TRAV40A0A0B4J280 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 VTRNA1-1-201ENST00000363120 99 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 SNORD114-30-201ENST00000364448 72 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 MIR514A1-201ENST00000385133 98 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AL031577.2-201ENST00000404133 280 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AL139397.2-201ENST00000404529 772 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC107081.1-201ENST00000414975 361 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 NPM1P11-201ENST00000417106 855 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 CCDC58P2-201ENST00000417131 366 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC018630.2-202ENST00000422992 927 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC109583.1-201ENST00000432156 268 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 CETN4P-201ENST00000432407 469 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 RPL37P21-201ENST00000435890 276 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 HIGD1AP11-201ENST00000438361 280 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AL049734.2-201ENST00000441066 616 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AL592447.1-201ENST00000447592 540 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC034222.1-201ENST00000494052 532 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 PANCR-202ENST00000513690 448 ntTSL 2 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC114797.1-201ENST00000514003 728 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 RNU1-61P-201ENST00000516107 151 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 RNA5SP216-201ENST00000516111 123 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 RNU6-1256P-201ENST00000516539 103 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AC107934.1-201ENST00000522215 217 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 ERHP1-201ENST00000523006 310 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 AP003122.4-201ENST00000530980 758 ntBASIC1.98□□□□□ -2.09
TRAV40A0A0B4J280 EMP1-206ENST00000537612 505 ntTSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms