Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 MTCYBP40-201ENST00000509390 1135 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 XIAPP1-201ENST00000603162 600 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 ATP1B3P1-201ENST00000605365 821 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 MIR378J-201ENST00000611988 109 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 AC015967.1-201ENST00000619893 476 ntBASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
PPARGC1AQ9UBK2 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 Y_RNA.145-201ENST00000363527 102 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 SNORA62-201ENST00000365493 153 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 RNU6-1074P-201ENST00000383995 104 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 SNORA36C-201ENST00000384289 132 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 RNU6-328P-201ENST00000390887 106 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 SNORA75.4-201ENST00000391278 119 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC244098.2-201ENST00000422068 99 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AL160275.3-201ENST00000423876 471 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AL591212.2-201ENST00000433923 257 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC109327.1-201ENST00000471666 403 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 UQCRHP4-201ENST00000471686 272 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC106872.2-201ENST00000494303 480 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 PARP4P3-201ENST00000510265 317 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 RNA5SP519-201ENST00000516480 119 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 IPO5P1-202ENST00000600039 287 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 RNU6ATAC35P-201ENST00000609276 444 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AL445567.2-201ENST00000618935 498 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 AC010378.1-201ENST00000619270 362 ntBASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 WDR72-204ENST00000559418 3602 ntTSL 5 BASIC4.38□□□□□ -1.71
PPARGC1AQ9UBK2 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 HSPA8P4-201ENST00000511877 1920 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC008725.1-201ENST00000605123 2263 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 Y_RNA.112-201ENST00000363250 102 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC117470.1-201ENST00000381974 330 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 Y_RNA.480-201ENST00000384364 102 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 MIR1179-201ENST00000408703 91 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC092809.3-201ENST00000415453 231 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 RPL26P6-201ENST00000440913 438 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 RPL23AP2-201ENST00000471227 466 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC110792.1-201ENST00000491826 472 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC026979.1-201ENST00000492525 396 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC026801.1-201ENST00000497178 464 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 GMPSP1-201ENST00000514075 579 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 RNA5SP309-201ENST00000516670 106 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AP003730.1-201ENST00000524605 285 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 SNRPGP15-201ENST00000600149 222 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 DUSP12P1-201ENST00000612874 516 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AC244517.12-201ENST00000623581 663 ntBASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.37□□□□□ -1.71
PPARGC1AQ9UBK2 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.36□□□□□ -1.71
PPARGC1AQ9UBK2 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.36□□□□□ -1.71
PPARGC1AQ9UBK2 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
PPARGC1AQ9UBK2 SNORD3E-201ENST00000362899 217 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms