Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 RPS4XP13-201ENST00000483219 789 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 MTCO1P35-201ENST00000515270 228 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 RNU6-143P-201ENST00000516942 93 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC087369.1-201ENST00000520775 996 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 YPEL5P3-201ENST00000547227 352 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 PARP1P2-201ENST00000556806 195 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC106782.4-201ENST00000568264 210 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC011712.1-201ENST00000588959 234 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC020910.2-201ENST00000603635 610 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC090132.2-201ENST00000615881 347 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 AC048347.1-201ENST00000624621 427 ntBASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
TRIM54Q9BYV2 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 MTND4P12-201ENST00000498999 1377 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 SPRR2C-201ENST00000290702 219 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 RNU6-1167P-201ENST00000363227 94 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 RNU6-38P-201ENST00000384085 107 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 MIR493-201ENST00000385254 89 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AL138878.1-201ENST00000405131 347 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 PPIAP31-201ENST00000405422 495 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 RNA5SP317-201ENST00000410176 116 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 RNA5SP311-201ENST00000411290 116 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC245054.1-201ENST00000420944 258 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AL591704.1-201ENST00000432574 275 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 TBCAP1-201ENST00000436520 327 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 HMGB1P12-201ENST00000438594 598 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC009237.8-201ENST00000445492 379 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 HSFY6P-201ENST00000445573 403 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 RNU6-333P-201ENST00000459117 107 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC008628.2-201ENST00000502605 298 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC010486.1-201ENST00000511793 424 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 RNA5SP315-201ENST00000516340 116 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 RNA5SP312-201ENST00000517068 116 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC078814.3-201ENST00000553036 491 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AL606490.9-201ENST00000603331 271 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AL590392.1-201ENST00000604960 446 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 RNU6-89P-201ENST00000606519 100 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC025253.1-201ENST00000613623 543 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AC093913.1-201ENST00000614178 329 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 MIR6500-201ENST00000622700 86 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 AL672296.1-201ENST00000427780 2158 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 OTUD4P1-201ENST00000237841 3067 ntBASIC3.79□□□□□ -1.8
TRIM54Q9BYV2 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 CBX3P1-201ENST00000325243 554 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 Y_RNA.279-201ENST00000364763 95 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 MIR199A2-201ENST00000385289 110 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AL162578.1-201ENST00000406202 378 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 Z85995.1-201ENST00000415547 335 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 BX842559.1-201ENST00000419615 532 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AL451062.2-201ENST00000427515 271 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AC007919.1-201ENST00000429380 217 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 TAAR7P-201ENST00000436141 242 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 PMCHL2-203ENST00000457791 237 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 HMGN2P26-201ENST00000463169 339 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 RPS15AP34-201ENST00000487776 387 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AL160314.1-201ENST00000490836 438 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 MTCO2P30-201ENST00000503662 364 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 APOOP4-201ENST00000513530 597 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AC046134.1-201ENST00000514454 666 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 RNU6-914P-201ENST00000516749 109 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 PSMA2P1-201ENST00000526365 646 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 HSPE1P5-201ENST00000561489 272 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 MIR4424-201ENST00000585257 86 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 UBE2V2P2-201ENST00000587677 504 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AL020997.2-201ENST00000602607 184 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AC098826.3-201ENST00000603823 466 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AC013553.2-201ENST00000604244 589 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 MIR15A-201ENST00000607334 83 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 AC103710.3-201ENST00000608157 948 ntBASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
TRIM54Q9BYV2 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms