Protein–RNA interactions for Protein: Q9BXL8

CDCA4, Cell division cycle-associated protein 4, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4Q9BXL8 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 RNU6-707P-201ENST00000364647 95 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 SNORA16B-201ENST00000364674 135 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 RN7SKP223-201ENST00000410582 62 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 MTCYBP45-201ENST00000435243 565 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AL513124.1-201ENST00000450410 614 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 MTCO3P11-201ENST00000455103 774 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 RPS20P20-201ENST00000460498 340 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC090515.1-201ENST00000465295 476 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 RNU6-528P-201ENST00000516926 100 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 HSPE1P3-201ENST00000559254 309 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC008121.1-201ENST00000603244 268 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AL118556.2-201ENST00000614375 824 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 SDR42E1P2-201ENST00000614861 481 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AL162373.1-201ENST00000620433 407 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 SDR42E1P4-201ENST00000620894 481 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC025048.6-202ENST00000627667 438 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 AC091948.2-201ENST00000636510 279 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 MTND1P37-201ENST00000636562 264 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 MKKS-204ENST00000639674 192 ntBASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.83□□□□□ -2.12
CDCA4Q9BXL8 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 SNRPEP3-201ENST00000338402 276 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 Y_RNA.25-201ENST00000362528 102 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 SNORA46.1-201ENST00000391069 153 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 DHFRP6-201ENST00000401776 268 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 RNA5SP270-201ENST00000411361 118 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC003685.2-201ENST00000422795 395 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 DPRXP1-201ENST00000426312 460 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 MED14P1-201ENST00000430517 648 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AL139415.2-201ENST00000431968 163 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC093155.1-201ENST00000440164 826 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 FAM103A2P-201ENST00000444122 354 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC244505.3-201ENST00000454598 187 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC022493.1-201ENST00000492984 337 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC090453.1-201ENST00000495560 436 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 TMEM251P1-201ENST00000503717 318 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC104090.1-201ENST00000506341 1171 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC093677.1-201ENST00000514414 678 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 RNU6-1261P-201ENST00000517194 104 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 HMGN1P28-201ENST00000521340 364 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AL133241.1-201ENST00000556832 487 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 MIR4648-201ENST00000580107 72 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AP000403.1-201ENST00000603349 851 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC011451.2-201ENST00000604303 598 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC136601.2-201ENST00000604356 474 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 MTND4LP5-201ENST00000605152 292 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AL583856.2-201ENST00000606298 543 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC007349.4-201ENST00000608114 532 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AL512506.1-201ENST00000613918 449 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 MIR6873-201ENST00000622788 63 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC087821.2-201ENST00000637086 450 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 MIR1322-201ENST00000638013 71 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 MTND5P30-201ENST00000452896 1731 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 AC010889.1-201ENST00000566193 2666 ntBASIC1.82□□□□□ -2.12
CDCA4Q9BXL8 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 KPNA2P1-201ENST00000458289 1591 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 MTND5P6-201ENST00000422338 1798 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 RNA5SP125-201ENST00000364843 120 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 SNORD65.1-201ENST00000390889 71 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 ZYG11AP1-201ENST00000430329 837 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AC092427.1-201ENST00000439177 601 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AC098831.1-201ENST00000440661 216 ntBASIC1.81□□□□□ -2.12
CDCA4Q9BXL8 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms