Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 RPL21P5-201ENST00000554662 472 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC067959.1-201ENST00000604334 379 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 NUTF2P8-201ENST00000604593 363 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC007619.2-201ENST00000605743 379 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AL451064.1-201ENST00000607718 471 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 AC025048.6-202ENST00000627667 438 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 MIR3974-201ENST00000637126 96 ntBASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.72□□□□□ -1.97
CCDC197Q8NCU1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.71□□□□□ -1.97
CCDC197Q8NCU1 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 RNU1-64P-201ENST00000365443 163 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 MIR937-201ENST00000401271 86 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC009518.2-201ENST00000418056 731 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 RPS15AP12-201ENST00000419498 388 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 SEPT2P1-201ENST00000419651 180 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC090960.1-201ENST00000421072 306 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC129850.1-201ENST00000436203 508 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 CR769767.1-201ENST00000436337 346 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 DDX3P2-201ENST00000446138 111 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 SNRPGP9-201ENST00000456025 225 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC138853.1-201ENST00000503549 823 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 RNA5SP471-201ENST00000516971 106 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 RNA5SP337-201ENST00000517007 109 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 RNA5SP402-201ENST00000517148 110 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC007458.1-201ENST00000542812 373 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 ARL6IP1P1-201ENST00000545836 610 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC007448.1-201ENST00000582714 234 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC098826.3-201ENST00000603823 466 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AL136363.1-201ENST00000605349 337 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 FTX_3.1-201ENST00000610451 147 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC091304.9-201ENST00000612091 226 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 AC083809.1-201ENST00000615051 472 ntBASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.71□□□□□ -1.98
CCDC197Q8NCU1 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 FGF7P2-201ENST00000332473 296 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 RNU6-1167P-201ENST00000363227 94 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 RNU6-701P-201ENST00000384059 107 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 RNA5SP210-201ENST00000391034 120 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 HMGN1P14-201ENST00000412459 517 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL589872.1-201ENST00000426602 288 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 HMGB3P12-201ENST00000438745 556 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 MTND6P13-201ENST00000443510 523 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 MTCO2P29-201ENST00000465212 189 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 RAP1BP2-201ENST00000478270 544 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 RN7SL432P-201ENST00000484057 298 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC010587.1-201ENST00000505809 469 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC091826.1-201ENST00000514065 313 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 RNA5SP290-201ENST00000517133 127 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 SNORA31.21-201ENST00000517180 77 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC011611.1-201ENST00000552179 197 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL391261.3-201ENST00000557194 520 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 BNIP3P8-201ENST00000597863 560 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL670379.6-201ENST00000603753 252 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL670379.11-201ENST00000604059 253 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL358072.1-201ENST00000604156 575 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL161798.1-201ENST00000604630 131 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC008162.1-201ENST00000604718 254 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL670379.1-201ENST00000604752 252 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL670379.5-201ENST00000605253 252 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL670379.12-201ENST00000605291 253 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL670379.8-201ENST00000605353 252 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 RPL23AP88-201ENST00000605759 454 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC068276.1-201ENST00000605793 379 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL670379.7-201ENST00000605823 252 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AL137847.3-201ENST00000611521 109 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 AC025594.3-201ENST00000613068 790 ntBASIC2.7□□□□□ -1.98
CCDC197Q8NCU1 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms