Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 MTND4P25-201ENST00000441039 533 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 UQCRHP3-201ENST00000451503 251 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 RPL7P5-201ENST00000471472 736 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 AC233702.1-201ENST00000482905 502 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.3□□□□□ -1.88
HOXD13P35453 RNU6-1092P-201ENST00000516955 87 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 RNA5SP337-201ENST00000517007 109 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXD13P35453 PSMA2P1-201ENST00000526365 646 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXD13P35453 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXD13P35453 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
HOXD13P35453 ARL2BPP2-201ENST00000550907 489 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.3□□□□□ -1.88
HOXD13P35453 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.3□□□□□ -1.88
HOXD13P35453 HMGN1P30-201ENST00000589286 268 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 AC098826.3-201ENST00000603823 466 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 Z94722.1-201ENST00000604328 474 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 AL161798.1-201ENST00000604630 131 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.3□□□□□ -1.88
HOXD13P35453 AC008250.2-201ENST00000615261 205 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 AL589994.2-201ENST00000621124 579 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 AP003399.1-201ENST00000637534 361 ntBASIC3.3□□□□□ -1.88
HOXD13P35453 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HOXD13P35453 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
HOXD13P35453 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
HOXD13P35453 GNG5P1-201ENST00000255500 204 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 RNU5E-6P-201ENST00000365574 115 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 RNU2-36P-201ENST00000410361 191 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 RNU2-68P-201ENST00000410878 191 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 HMGN1P14-201ENST00000412459 517 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 HMGN2P30-201ENST00000423237 256 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
HOXD13P35453 AL589872.1-201ENST00000426602 288 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 TRIAP1P1-201ENST00000427062 225 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 DPPA2P1-201ENST00000428060 556 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.29□□□□□ -1.88
HOXD13P35453 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC3.29□□□□□ -1.88
HOXD13P35453 AC010153.1-201ENST00000432862 727 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AC098826.1-201ENST00000433943 471 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AL671855.1-201ENST00000446875 1203 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXD13P35453 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXD13P35453 AL033528.1-201ENST00000453780 140 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 RPL12P25-201ENST00000455592 494 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 RPL26P9-201ENST00000457466 433 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 snoU13.22-201ENST00000459428 104 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXD13P35453 MTND1P3-201ENST00000484956 952 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AC114786.4-201ENST00000508771 728 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AC119751.5-201ENST00000514077 770 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXD13P35453 AC087373.1-201ENST00000524920 491 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
HOXD13P35453 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.29□□□□□ -1.88
HOXD13P35453 RPL23AP78-201ENST00000599928 470 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 DUXAP4-201ENST00000603046 613 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AC174048.1-201ENST00000603389 144 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 AC004805.2-201ENST00000605382 482 ntBASIC3.29□□□□□ -1.88
HOXD13P35453 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.29□□□□□ -1.88
HOXD13P35453 AC073346.2-201ENST00000624724 2058 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 FGF7P2-201ENST00000332473 296 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 RNU6-960P-201ENST00000364056 120 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 RPL23AP32-201ENST00000395315 459 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXD13P35453 RPS3AP3-201ENST00000411933 242 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXD13P35453 ELOCP4-201ENST00000420090 333 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXD13P35453 MTND1P28-201ENST00000435623 950 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXD13P35453 AC009961.3-201ENST00000449832 765 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXD13P35453 RPL21P41-201ENST00000459863 264 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 RN7SL283P-201ENST00000489055 303 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 RN7SKP43-201ENST00000516173 320 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.28□□□□□ -1.88
HOXD13P35453 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXD13P35453 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXD13P35453 AC005951.1-201ENST00000576706 485 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 MIR5195-201ENST00000583555 115 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 AC073114.1-201ENST00000612027 490 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 UBE2Q2P2-203ENST00000613592 761 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.28□□□□□ -1.88
HOXD13P35453 AC099654.13-201ENST00000639774 207 ntBASIC3.28□□□□□ -1.88
HOXD13P35453 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
HOXD13P35453 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
HOXD13P35453 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD13P35453 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
HOXD13P35453 AC073343.1-201ENST00000328239 651 ntBASIC3.27□□□□□ -1.89
HOXD13P35453 SNORD56.2-201ENST00000363242 71 ntBASIC3.27□□□□□ -1.89
HOXD13P35453 RNU6-884P-201ENST00000363889 107 ntBASIC3.27□□□□□ -1.89
HOXD13P35453 RNA5SP387-201ENST00000364226 106 ntBASIC3.27□□□□□ -1.89
HOXD13P35453 RNU6-512P-201ENST00000364438 103 ntBASIC3.27□□□□□ -1.89
HOXD13P35453 MIR767-201ENST00000390228 109 ntBASIC3.27□□□□□ -1.89
HOXD13P35453 SNORA40.3-201ENST00000390964 122 ntBASIC3.27□□□□□ -1.89
HOXD13P35453 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC3.27□□□□□ -1.89
HOXD13P35453 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC3.27□□□□□ -1.89
HOXD13P35453 MTND6P13-201ENST00000443510 523 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms