Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcsQ9WU84 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcsQ9WU84 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
CcsQ9WU84 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcsQ9WU84 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC12.66□□□□□ -0.38
CcsQ9WU84 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CcsQ9WU84 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC12.65□□□□□ -0.38
CcsQ9WU84 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
CcsQ9WU84 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
CcsQ9WU84 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Prob1-201ENSMUST00000097619 3021 ntBASIC12.65□□□□□ -0.38
CcsQ9WU84 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC12.65□□□□□ -0.38
CcsQ9WU84 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
CcsQ9WU84 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CcsQ9WU84 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.65□□□□□ -0.39
CcsQ9WU84 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
CcsQ9WU84 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
CcsQ9WU84 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
CcsQ9WU84 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC12.64□□□□□ -0.39
CcsQ9WU84 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC12.64□□□□□ -0.39
CcsQ9WU84 Gm10138-203ENSMUST00000206952 366 ntBASIC12.64□□□□□ -0.39
CcsQ9WU84 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.64□□□□□ -0.39
CcsQ9WU84 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CcsQ9WU84 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.64□□□□□ -0.39
CcsQ9WU84 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
CcsQ9WU84 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
CcsQ9WU84 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
CcsQ9WU84 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC12.64□□□□□ -0.39
CcsQ9WU84 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
CcsQ9WU84 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.63□□□□□ -0.39
CcsQ9WU84 Gm10698-201ENSMUST00000182663 604 ntBASIC12.63□□□□□ -0.39
CcsQ9WU84 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.63□□□□□ -0.39
CcsQ9WU84 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC12.63□□□□□ -0.39
CcsQ9WU84 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC12.63□□□□□ -0.39
CcsQ9WU84 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
CcsQ9WU84 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
CcsQ9WU84 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
CcsQ9WU84 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC12.63□□□□□ -0.39
CcsQ9WU84 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
CcsQ9WU84 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcsQ9WU84 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcsQ9WU84 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcsQ9WU84 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcsQ9WU84 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcsQ9WU84 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CcsQ9WU84 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CcsQ9WU84 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 101.8 ms