Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Scn8aQ9WTU3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Gm11780-201ENSMUST00000136880 516 ntBASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Gm6376-201ENSMUST00000209407 580 ntBASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Pmf1-205ENSMUST00000193338 795 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Scn8aQ9WTU3 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Gm5682-201ENSMUST00000173402 505 ntBASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Gm6550-201ENSMUST00000187574 993 ntBASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Scn8aQ9WTU3 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Gm27646-201ENSMUST00000183989 110 ntBASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Gm44771-201ENSMUST00000206975 626 ntBASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Scn8aQ9WTU3 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Scn8aQ9WTU3 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Mir5131-201ENSMUST00000175426 93 ntBASIC16.22■□□□□ 0.19
Scn8aQ9WTU3 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms