Protein–RNA interactions for Protein: Q9QXZ7

Nr2e3, Photoreceptor-specific nuclear receptor, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr2e3Q9QXZ7 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Gm28265-201ENSMUST00000188201 2319 ntBASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Nr2e3Q9QXZ7 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 AC153794.1-201ENSMUST00000169148 126 ntBASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Mir3081-201ENSMUST00000175305 84 ntBASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Gm27357-201ENSMUST00000183754 135 ntBASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Nr2e3Q9QXZ7 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Gm13312-201ENSMUST00000119631 718 ntBASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Gm17807-201ENSMUST00000186869 298 ntBASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Nr2e3Q9QXZ7 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Gm6858-201ENSMUST00000208582 1468 ntBASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Nr2e3Q9QXZ7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr2e3Q9QXZ7 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC18.33■□□□□ 0.53
Nr2e3Q9QXZ7 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr2e3Q9QXZ7 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr2e3Q9QXZ7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Nr2e3Q9QXZ7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Gm10819-201ENSMUST00000099988 561 ntBASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.33■□□□□ 0.52
Nr2e3Q9QXZ7 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms