Protein–RNA interactions for Protein: Q9JJV9

Scn5a, Sodium channel protein type 5 subunit alpha, mousemouse

Predictions only

Length 2,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn5aQ9JJV9 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC16.71■□□□□ 0.26
Scn5aQ9JJV9 Slc22a16-202ENSMUST00000078314 2269 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Gm8344-201ENSMUST00000119813 856 ntBASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Gm27300-201ENSMUST00000184085 97 ntBASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Gm27335-201ENSMUST00000184758 97 ntBASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Gm13597-201ENSMUST00000121239 375 ntBASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Gm10576-201ENSMUST00000191927 825 ntBASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC16.7■□□□□ 0.26
Scn5aQ9JJV9 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Gm7063-201ENSMUST00000186840 981 ntBASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Scn5aQ9JJV9 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Sil1-201ENSMUST00000025215 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Gm14701-201ENSMUST00000117156 348 ntBASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Gm45167-201ENSMUST00000208007 322 ntBASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC16.68■□□□□ 0.26
Scn5aQ9JJV9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Scn5aQ9JJV9 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms