Protein–RNA interactions for Protein: Q9JIS7

Cacna1f, Voltage-dependent L-type calcium channel subunit alpha-1F, mousemouse

Predictions only

Length 1,985 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1fQ9JIS7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Gm4913-201ENSMUST00000117075 1290 ntBASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cacna1fQ9JIS7 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Gm5177-201ENSMUST00000183092 997 ntBASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Gm15358-201ENSMUST00000119249 520 ntBASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cacna1fQ9JIS7 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Gm43125-201ENSMUST00000201724 730 ntBASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cacna1fQ9JIS7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Gm45167-201ENSMUST00000208007 322 ntBASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cacna1fQ9JIS7 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Gm4899-201ENSMUST00000178708 719 ntBASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Gm5366-201ENSMUST00000215494 1338 ntBASIC18.33■□□□□ 0.52
Cacna1fQ9JIS7 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Gm7787-201ENSMUST00000216858 688 ntBASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC18.32■□□□□ 0.52
Cacna1fQ9JIS7 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms