Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm44878-201ENSMUST00000205812 1295 ntBASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Tnfrsf13bQ9ET35 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Phf7-203ENSMUST00000226565 1971 ntBASIC12.8□□□□□ -0.36
Tnfrsf13bQ9ET35 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm13181-201ENSMUST00000120117 1069 ntBASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 AC164629.5-201ENSMUST00000220387 632 ntBASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Tnfrsf13bQ9ET35 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Tnfrsf13bQ9ET35 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms