Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.08■□□□□ 0.33
Tlr9Q9EQU3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC17.08■□□□□ 0.33
Tlr9Q9EQU3 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tlr9Q9EQU3 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.08■□□□□ 0.33
Tlr9Q9EQU3 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tlr9Q9EQU3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tlr9Q9EQU3 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tlr9Q9EQU3 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tlr9Q9EQU3 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Tlr9Q9EQU3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Gm27389-201ENSMUST00000183622 195 ntBASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Mir1668-201ENSMUST00000184114 107 ntBASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Tlr9Q9EQU3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 25.5 ms