Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Vps35Q9EQH3 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Gm33142-201ENSMUST00000193913 867 ntBASIC16.28■□□□□ 0.2
Vps35Q9EQH3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Vps35Q9EQH3 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Vps35Q9EQH3 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps35Q9EQH3 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps35Q9EQH3 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Vps35Q9EQH3 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.27■□□□□ 0.19
Vps35Q9EQH3 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Vps35Q9EQH3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Vps35Q9EQH3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Vps35Q9EQH3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms