Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Gm8825-201ENSMUST00000182565 998 ntBASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Gm4518-201ENSMUST00000182638 718 ntBASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Gm8330-201ENSMUST00000182754 1008 ntBASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Gm4575-201ENSMUST00000182991 1002 ntBASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Gm8709-201ENSMUST00000183230 1012 ntBASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Gm10293-201ENSMUST00000076317 1002 ntBASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Gm6316-201ENSMUST00000082064 1020 ntBASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Gm43072-201ENSMUST00000200283 1671 ntBASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 AC154757.1-201ENSMUST00000228289 336 ntBASIC22.31■■□□□ 1.16
Cpsf1Q9EPU4 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf1Q9EPU4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf1Q9EPU4 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf1Q9EPU4 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Gm28265-201ENSMUST00000188201 2319 ntBASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 AC159106.1-201ENSMUST00000224421 690 ntBASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Gm37166-201ENSMUST00000195473 2474 ntBASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cpsf1Q9EPU4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Cpsf1Q9EPU4 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Cpsf1Q9EPU4 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Cpsf1Q9EPU4 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 AC127302.2-201ENSMUST00000215212 268 ntBASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC22.26■■□□□ 1.15
Cpsf1Q9EPU4 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 254.1 ms