Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Chmp2aQ9DB34 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Gm21362-201ENSMUST00000194272 928 ntBASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Chmp2aQ9DB34 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.96■□□□□ 0.3
Chmp2aQ9DB34 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Chmp2aQ9DB34 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Chmp2aQ9DB34 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Gm13216-201ENSMUST00000117145 591 ntBASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Gm27704-201ENSMUST00000185094 107 ntBASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Chmp2aQ9DB34 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Chmp2aQ9DB34 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Chmp2aQ9DB34 Gm45328-201ENSMUST00000210942 917 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 132.6 ms