Protein–RNA interactions for Protein: Q9D6Z1

Nop56, Nucleolar protein 56, mousemouse

Known RBP Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nop56Q9D6Z1 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Gm43183-201ENSMUST00000200632 547 ntBASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nop56Q9D6Z1 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Gm9731-201ENSMUST00000209480 747 ntBASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 AC164629.5-201ENSMUST00000220387 632 ntBASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nop56Q9D6Z1 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Gm45212-201ENSMUST00000205831 3403 ntBASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.8■□□□□ 0.28
Nop56Q9D6Z1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Gm18958-201ENSMUST00000174258 762 ntBASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC16.79■□□□□ 0.28
Nop56Q9D6Z1 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
Nop56Q9D6Z1 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms