Protein–RNA interactions for Protein: Q9D5J6

Shpk, Sedoheptulokinase, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShpkQ9D5J6 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ShpkQ9D5J6 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ShpkQ9D5J6 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
ShpkQ9D5J6 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Flg-201ENSMUST00000050758 1488 ntBASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Gm6576-201ENSMUST00000169678 883 ntBASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Gm43017-201ENSMUST00000198296 752 ntBASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
ShpkQ9D5J6 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Wnt10b-204ENSMUST00000226655 1807 ntBASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
ShpkQ9D5J6 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms