Protein–RNA interactions for Protein: Q9D4H7

Lonrf3, LON peptidase N-terminal domain and RING finger protein 3, mousemouse

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf3Q9D4H7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Lonrf3Q9D4H7 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 AC133598.3-202ENSMUST00000224219 531 ntBASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Lonrf3Q9D4H7 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Gm36967-201ENSMUST00000193814 266 ntBASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Birc2-201ENSMUST00000054878 378 ntBASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Lonrf3Q9D4H7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Lonrf3Q9D4H7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Gm12644-201ENSMUST00000119935 606 ntBASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Gm27459-201ENSMUST00000184860 107 ntBASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Gm43347-201ENSMUST00000200226 580 ntBASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 AC108846.1-201ENSMUST00000214531 513 ntBASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Lonrf3Q9D4H7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.77■□□□□ 0.59
Lonrf3Q9D4H7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lonrf3Q9D4H7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Lonrf3Q9D4H7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Lonrf3Q9D4H7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Rprl3-201ENSMUST00000157400 290 ntBASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Lonrf3Q9D4H7 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lonrf3Q9D4H7 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Lonrf3Q9D4H7 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms