Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trim42Q9D2H5 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Gm13158-201ENSMUST00000122007 736 ntBASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trim42Q9D2H5 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Gm12382-201ENSMUST00000122005 922 ntBASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trim42Q9D2H5 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trim42Q9D2H5 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trim42Q9D2H5 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Gm37179-201ENSMUST00000194862 823 ntBASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Gm42545-201ENSMUST00000202755 922 ntBASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trim42Q9D2H5 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Gm37912-201ENSMUST00000191895 3076 ntBASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trim42Q9D2H5 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trim42Q9D2H5 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trim42Q9D2H5 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms